RNA–Protein interactions for RNA: ENST00000423368.6

CNOT4-205, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT4, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-205ENST00000423368 IVDP26440 423 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 IL6STP40189 918 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 CAV1Q03135 178 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 MMRN1Q13201 1228 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 GCKRQ14397 625 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 HERC3Q15034 1050 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 AKIRIN2Q53H80 203 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 GARNL3Q5VVW2 1013 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 STEAP3Q658P3 488 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 KIAA1324Q6UXG2 1013 aaKnown RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 EFL1Q7Z2Z2 1120 aaKnown RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 FAM83AQ86UY5 434 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 ANGPTL6Q8NI99 470 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 FAM174AQ8TBP5 190 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 RCN3Q96D15 328 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 CALML4Q96GE6 196 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 YME1L1Q96TA2 773 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 GAS2L1Q99501 681 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 KCTD14Q9BQ13 255 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 NAT9Q9BTE0 207 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 INO80BQ9C086 356 aaPredicted RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 VPS33BQ9H267 617 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 IARS2Q9NSE4 1012 aaKnown RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 TRMT13Q9NUP7 481 aaKnown RBP6.95□□□□□ -1.3
CNOT4-205ENST00000423368 WHRNQ9P202 907 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 RIPK3Q9Y572 518 aa6.95□□□□□ -1.3
CNOT4-205ENST00000423368 DLG5Q8TDM6 1919 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 A0A0B4J269 797 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PNMA6FA0A0J9YX94 578 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 C3orf80F5H4A9 247 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 F8W810 466 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TOR1AO14656 332 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PDGFAP04085 211 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 F7P08709 466 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 RNF224P0DH78 156 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 HSPA6P17066 643 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 M6PRP20645 277 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PIK3R1P27986 724 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TNNI2P48788 182 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ADCY7P51828 1080 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TPD52P55327 224 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ENPEPQ07075 957 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PCDH1Q08174 1060 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ART3Q13508 389 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PFKFB3Q16875 520 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 MROH9Q5TGP6 573 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TXNDC11Q6PKC3 985 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 LIPIQ6XZB0 460 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 STRA8Q7Z7C7 330 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TBC1D21Q8IYX1 336 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 B3GALT6Q96L58 329 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 RHOBTB2Q9BYZ6 727 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 VPS11Q9H270 941 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 WDR55Q9H6Y2 383 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 IL1RL2Q9HB29 575 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TBC1D13Q9NVG8 400 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 KCNK4Q9NYG8 393 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 SPATA2Q9UM82 520 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 COMMD10Q9Y6G5 202 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 SNCAIPQ9Y6H5 919 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 KIF13AQ9H1H9 1805 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 SCAMP2O15127 329 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 HOXA2O43364 376 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PGK2P07205 417 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TRIM49P0CI25 452 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TRIM49CP0CI26 452 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 XRCC5P13010 732 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 GSTM2P28161 218 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 PKLRP30613 574 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 NPY2RP49146 381 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ATN1P54259 1190 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TRIM32Q13049 653 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 CEACAM7Q14002 265 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TAB1Q15750 504 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TMEM198Q66K66 360 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 CRTC1Q6UUV9 634 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ZNF704Q6ZNC4 412 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 LARGE2Q8N3Y3 721 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 MAGEE2Q8TD90 523 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ZNF641Q96N77 438 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 RBM14Q96PK6 669 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 NPAS2Q99743 824 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TINF2Q9BSI4 451 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 BDH2Q9BUT1 245 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 HDHD5Q9BXW7 423 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ROGDIQ9GZN7 287 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 RANBP3Q9H6Z4 567 aaPredicted RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 INTS7Q9NVH2 962 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 AFF4Q9UHB7 1163 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TRPS1Q9UHF7 1281 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 NUFIP1Q9UHK0 495 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ENPP5Q9UJA9 477 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 EDARQ9UNE0 448 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 DIMT1Q9UNQ2 313 aaKnown RBP6.94□□□□□ -1.3
CNOT4-205ENST00000423368 HSPB11Q9Y547 144 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 ACTL7BQ9Y614 415 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 TULP4Q9NRJ4 1543 aa6.94□□□□□ -1.3
CNOT4-205ENST00000423368 MYH14Q7Z406 1995 aaKnown RBP6.93□□□□□ -1.3
CNOT4-205ENST00000423368 NEURL1BA8MQ27 555 aa6.93□□□□□ -1.3
CNOT4-205ENST00000423368 DFNA5O60443 496 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms