RNA–Protein interactions for RNA: ENST00000421462.5

PKP4-204, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 3,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-204ENST00000421462 PFKMP08237 780 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 MAP4P27816 1152 aaKnown RBP16.86■□□□□ 0.29
PKP4-204ENST00000421462 CLCN3P51790 818 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 DPYSQ14117 519 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 ZBED5Q49AG3 693 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 TBCELQ5QJ74 424 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 KDELC2Q7Z4H8 507 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 TTC30AQ86WT1 665 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 PPP1R10Q96QC0 940 aaKnown RBP16.86■□□□□ 0.29
PKP4-204ENST00000421462 TSC22D4Q9Y3Q8 395 aa16.86■□□□□ 0.29
PKP4-204ENST00000421462 GPR25O00155 361 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 GNL1P36915 607 aaPredicted RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 SURF1Q15526 300 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 LYSMD3Q7Z3D4 306 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 NT5DC4Q86YG4 428 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 SPPL2CQ8IUH8 684 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 ARL10Q8N8L6 244 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 PBXIP1Q96AQ6 731 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 MUC3BQ9H195 1237 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 RPF2Q9H7B2 306 aaKnown RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 CORINQ9Y5Q5 1042 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 B4GAT1O43505 415 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 DLX3O60479 287 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 ZFXP17010 805 aaPredicted RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 BCAP31P51572 246 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 BMXP51813 675 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 CTBP1Q13363 440 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 RAB39AQ14964 217 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 REP15Q6BDI9 236 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 DHFR2Q86XF0 187 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 ZC3H7AQ8IWR0 971 aaKnown RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 LSMEM2Q8N112 164 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 DQX1Q8TE96 717 aaKnown RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 KHSRPQ92945 711 aaKnown RBP eCLIP16.85■□□□□ 0.296e-7■■■□□ 15.4
PKP4-204ENST00000421462 BORCS5Q969J3 196 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 NXNL1Q96CM4 212 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 LRCH3Q96II8 777 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 VPS50Q96JG6 964 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 NT5C1AQ9BXI3 368 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 CDT1Q9H211 546 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 HIPK3Q9H422 1215 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 LRRC40Q9H9A6 602 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 ARID2Q68CP9 1835 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 NRXN2Q9P2S2 1712 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 SPATA31C2B4DYI2 1134 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 MRASO14807 208 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 HOXD12P35452 270 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 EFNA5P52803 228 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 PITX1P78337 314 aaPredicted RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 SOWAHAQ2M3V2 549 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 SNX29P2Q8IUI4 249 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 CDHR1Q96JP9 859 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 SLC45A3Q96JT2 553 aa16.85■□□□□ 0.29
PKP4-204ENST00000421462 UPF3AQ9H1J1 476 aaKnown RBP16.85■□□□□ 0.29
PKP4-204ENST00000421462 STAG3L1P0CL83 205 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 CDH3P22223 829 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 NUMBP49757 651 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 CLCN2P51788 898 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 NHSL2Q5HYW2 709 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 PERM1Q5SV97 790 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 PRAMEF18Q5VWM3 479 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 TMEM53Q6P2H8 277 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 GALNT18Q6P9A2 607 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 SIX6OS1Q8N1H7 587 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 LPAR1Q92633 364 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 TBCBQ99426 244 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 PCYT2Q99447 389 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 FBRSL1Q9HCM7 1045 aaKnown RBP16.84■□□□□ 0.29
PKP4-204ENST00000421462 VPS45Q9NRW7 570 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 CACNA2D2Q9NY47 1150 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 BPTFQ12830 3046 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 TADA2AO75478 443 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 NCAM1P13591 858 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 NMBRP28336 390 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 LRPAP1P30533 357 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 HMGCS2P54868 508 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 BTG3Q14201 252 aaPredicted RBP16.84■□□□□ 0.29
PKP4-204ENST00000421462 C4orf22Q6V702 233 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 ALDH16A1Q8IZ83 802 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 SLC15A4Q8N697 577 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 TBC1D15Q8TC07 691 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 PHF21BQ96EK2 531 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 ADI1Q9BV57 179 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 PIF1Q9H611 641 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 PRDM16Q9HAZ2 1276 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 WDR37Q9Y2I8 494 aa16.84■□□□□ 0.29
PKP4-204ENST00000421462 TMEM247A6NEH6 219 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 MDM4O15151 490 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 CLOCKO15516 846 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 NOL3O60936 208 aaKnown RBP16.83■□□□□ 0.29
PKP4-204ENST00000421462 DDHD2O94830 711 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 MPOP05164 745 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 SBK3P0C264 359 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 SPANXN3Q5MJ09 141 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 KCTD8Q6ZWB6 473 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 UTS2BQ765I0 119 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 CNTD1Q8N815 330 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 BPIFB6Q8NFQ5 453 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 SLC35B4Q969S0 331 aa16.83■□□□□ 0.29
PKP4-204ENST00000421462 SPAG4Q9NPE6 437 aa16.83■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms