RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 GXYLT1Q4G148 440 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 KIAA1755Q5JYT7 1200 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 PAPD7Q5XG87 772 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 CAVIN1Q6NZI2 390 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 MTFR2Q6P444 385 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 SLC30A9Q6PML9 568 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 CYP26C1Q6V0L0 522 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 CYB5R4Q7L1T6 521 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ANKRD13BQ86YJ7 626 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 KLBQ86Z14 1044 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 SCN4BQ8IWT1 228 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 RPAP2Q8IXW5 612 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 USP38Q8NB14 1042 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 LINS1Q8NG48 757 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 FAM110DQ8TAY7 271 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 PIGOQ8TEQ8 1089 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 IP6K1Q92551 441 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 RPL36ALQ969Q0 106 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 UBXN10Q96LJ8 280 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 PIMREGQ9BSJ6 248 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 TUBB6Q9BUF5 446 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 HERC2P3Q9BVR0 1158 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 LDHAL6BQ9BYZ2 381 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 RIC8AQ9NPQ8 531 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 PAPOLBQ9NRJ5 636 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 SLC22A11Q9NSA0 550 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 DIAPH3Q9NSV4 1193 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 TRNAU1APQ9NX07 287 aaKnown RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 TERF2IPQ9NYB0 399 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 RRN3Q9NYV6 651 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 KLQ9UEF7 1012 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 FBXO4Q9UKT5 387 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 DTX4Q9Y2E6 619 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 BTBD3Q9Y2F9 522 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 AK9Q5TCS8 1911 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 KIDINS220Q9ULH0 1771 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ATP7BP35670 1465 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 CDK12Q9NYV4 1490 aaPredicted RBP2.89□□□□□ -1.95
VPS41-206ENST00000418457 ADGRF5Q8IZF2 1346 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 TUBGCP6Q96RT7 1819 aa2.89□□□□□ -1.95
VPS41-206ENST00000418457 ABCC3O15438 1527 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 N4BP2Q86UW6 1770 aaPredicted RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 WDR91A4D1P6 747 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CXorf65A6NEN9 183 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 RHODO00212 210 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PRPF4O43172 522 aaKnown RBP eCLIP2.88□□□□□ -1.95
VPS41-206ENST00000418457 MSI1O43347 362 aaKnown RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 TLR2O60603 784 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 TSPAN3O60637 253 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 HMMRO75330 724 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 HLA-DQA2P01906 255 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PTMAP06454 111 aaKnown RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 CYP19A1P11511 503 aaPredicted RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 CKMT1AP12532 417 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CPA1P15085 419 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 AVPR2P30518 371 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CHRNA5P30532 468 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 RHAGQ02094 409 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 ZBTB16Q05516 673 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 DMTNQ08495 405 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 GOLGA8FQ08AF8 430 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 DLGAP5Q15398 846 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 SYCP1Q15431 976 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 MIDNQ504T8 468 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 HSP90AB4PQ58FF6 505 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CBWD5Q5RIA9 395 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 ISM2Q6H9L7 571 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 DENND1BQ6P3S1 775 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 RNF144BQ7Z419 303 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 GALNT7Q86SF2 657 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 LRRTM4Q86VH4 590 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CREBRFQ8IUR6 639 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PDCL2Q8N4E4 241 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 DENND1AQ8TEH3 1009 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 WIPF2Q8TF74 440 aaPredicted RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 IGFBPL1Q8WX77 278 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PIBF1Q8WXW3 757 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CLMNQ96JQ2 1002 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PPP1R10Q96QC0 940 aaKnown RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 TWNKQ96RR1 684 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CADM1Q9BY67 442 aaKnown RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 TSPY26PQ9H489 355 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 TMEM248Q9NWD8 314 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 SAGE1Q9NXZ1 904 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 TUBA8Q9NY65 449 aaPredicted RBP2.88□□□□□ -1.95
VPS41-206ENST00000418457 PRDM4Q9UKN5 801 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 UTS2RQ9UKP6 389 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 SUFUQ9UMX1 484 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 TNNQ9UQP3 1299 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 LAMP3Q9UQV4 416 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 GDAQ9Y2T3 454 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 ATP6V1DQ9Y5K8 247 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 CACNA1FO60840 1977 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PTPRMP28827 1452 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 MLH3Q9UHC1 1453 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 PCSK5Q92824 1860 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 ARHGEF40Q8TER5 1519 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 DLC1Q96QB1 1528 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 KNDC1Q76NI1 1749 aa2.88□□□□□ -1.95
VPS41-206ENST00000418457 A0A1W2PP64 1363 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms