RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 SDHAF4Q5VUM1 108 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 TMEM132CQ8N3T6 1108 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 CXorf40BQ96DE9 158 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 NSMCE2Q96MF7 247 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 COL20A1Q9P218 1284 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 RAB23Q9ULC3 237 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 PAGE1O75459 146 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 NFATC1O95644 943 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 CALCAP01258 141 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 YBEYP58557 167 aaPredicted RBP17.48■□□□□ 0.39
PHRF1-202ENST00000413872 GPR158Q5T848 1215 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 KHDRBS2Q5VWX1 349 aaKnown RBP17.48■□□□□ 0.39
PHRF1-202ENST00000413872 ADAMTSL2Q86TH1 951 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 TMPRSS6Q8IU80 811 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 CHPFQ8IZ52 775 aa17.48■□□□□ 0.39
PHRF1-202ENST00000413872 ZSCAN5DPP0CG00 497 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 HSPA14Q0VDF9 509 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 FAM98BQ52LJ0 330 aaKnown RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 UNKQ9C0B0 810 aaKnown RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 NDOR1Q9UHB4 597 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 CCDC154A6NI56 674 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 MLYCDO95822 493 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 PABPC1P11940 636 aaKnown RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 ATP5F1P24539 256 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 ABL2P42684 1182 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 ATAT1Q5SQI0 421 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 FUT10Q6P4F1 479 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 SMG7Q92540 1137 aaKnown RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 PHACTR1Q9C0D0 580 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 YIPF3Q9GZM5 350 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 CAAP1Q9H8G2 361 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 ATAD3AQ9NVI7 634 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 PCDHGC3Q9UN70 934 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 Q9Y3F1 56 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 SNX13Q9Y5W8 968 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 CCDC85CA6NKD9 419 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 A8MX80 341 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 TLX1P31314 330 aaPredicted RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 S100A3P33764 101 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 ATP6V0D1P61421 351 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 CYP20A1Q6UW02 462 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 UNC5AQ6ZN44 842 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 CATSPER2Q96P56 530 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 EBNA1BP2Q99848 306 aaKnown RBP17.47■□□□□ 0.39
PHRF1-202ENST00000413872 PCDH18Q9HCL0 1135 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 SNX8Q9Y5X2 465 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 FAM220BPB1ANY3 271 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 WDR47O94967 919 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 DCLRE1BQ9H816 532 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 RBPJLQ9UBG7 517 aa17.47■□□□□ 0.39
PHRF1-202ENST00000413872 AMD1P17707 334 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 FRG1Q14331 258 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 PLEKHA7Q6IQ23 1121 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 IFNL1Q8IU54 200 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 MICU2Q8IYU8 434 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 SNX27Q96L92 541 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 KREMEN1Q96MU8 473 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 CFAP97Q9P2B7 532 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 DEC1Q9P2X7 70 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 UBXN8O00124 270 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 PHGDHO43175 533 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 GTF2E2P29084 291 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 RPL3P39023 403 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 RPL14P50914 215 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 DSG1Q02413 1049 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 RCN1Q15293 331 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 ADRM1Q16186 407 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 SYT12Q8IV01 421 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 TMEM237Q96Q45 408 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 DNTTP04053 509 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 PTPN20Q4JDL3 420 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 ATP13A4Q4VNC1 1196 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 PRELID2Q8N945 189 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 SEMA4DQ92854 862 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 BRD9Q9H8M2 597 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 TBC1D30Q9Y2I9 924 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 A0A1W2PQH9 124 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 TPP1O14773 563 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 APODP05090 189 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 MRPS35P82673 323 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 TBL3Q12788 808 aaKnown RBP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 SLC26A9Q7LBE3 791 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 CYP4Z2PQ8N1L4 340 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 MAB21L3Q8N8X9 362 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 C1orf127Q8N9H9 656 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 STK32AQ8WU08 396 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 HDAC7Q8WUI4 952 aa17.46■□□□□ 0.39
PHRF1-202ENST00000413872 UPF1Q92900 1129 aaKnown RBP eCLIP17.46■□□□□ 0.39
PHRF1-202ENST00000413872 NTSP30990 170 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 VAC14Q08AM6 782 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 ZNF75CPQ92670 426 aaPredicted RBP17.45■□□□□ 0.38
PHRF1-202ENST00000413872 COPS8Q99627 209 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 URADA6NGE7 173 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 WNT7AO00755 349 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 MRASO14807 208 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 TCEA2Q15560 299 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 IL27RAQ6UWB1 636 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 RBFAQ8N0V3 343 aa17.45■□□□□ 0.38
PHRF1-202ENST00000413872 WDR48Q8TAF3 677 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms