RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 KCTD15Q96SI1 283 aaPredicted RBP26.8■■□□□ 1.88
VEGFA-207ENST00000413642 KDM4CQ9H3R0 1056 aa26.8■■□□□ 1.88
VEGFA-207ENST00000413642 HPCAL4Q9UM19 191 aa26.8■■□□□ 1.88
VEGFA-207ENST00000413642 CA5BQ9Y2D0 317 aa26.8■■□□□ 1.88
VEGFA-207ENST00000413642 A0A087X0T9 212 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 WASH4PA8MWX3 477 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 RNGTTO60942 597 aaKnown RBP26.79■■□□□ 1.88
VEGFA-207ENST00000413642 FAM228BP0C875 321 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 SPINK2P20155 84 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 C21orf59P57076 290 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 IL9RQ01113 521 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 ATXN7L2Q5T6C5 722 aaPredicted RBP26.79■■□□□ 1.88
VEGFA-207ENST00000413642 ERMARDQ5T6L9 678 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 ERN2Q76MJ5 926 aaKnown RBP26.79■■□□□ 1.88
VEGFA-207ENST00000413642 PRPF39Q86UA1 669 aaKnown RBP26.79■■□□□ 1.88
VEGFA-207ENST00000413642 FNIP1Q8TF40 1166 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 THAP2Q9H0W7 228 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 TSPY26PQ9H489 355 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 ZDHHC6Q9H6R6 413 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 CATSPERBQ9H7T0 1116 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 DYRK4Q9NR20 520 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 BZW2Q9Y6E2 419 aaKnown RBP26.79■■□□□ 1.88
VEGFA-207ENST00000413642 SCINQ9Y6U3 715 aa26.79■■□□□ 1.88
VEGFA-207ENST00000413642 LRCH4O75427 683 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 RNF8O76064 485 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 MYBL1P10243 752 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 TCF4P15884 667 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 CD38P28907 300 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 NFKBIBQ15653 356 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 TRIM69Q86WT6 500 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 UMODL1-AS1Q8N2C9 162 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 RNF214Q8ND24 703 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 SETD7Q8WTS6 366 aaKnown RBP26.78■■□□□ 1.88
VEGFA-207ENST00000413642 ISG20Q96AZ6 181 aaKnown RBP26.78■■□□□ 1.88
VEGFA-207ENST00000413642 TRIM11Q96F44 468 aa26.78■■□□□ 1.88
VEGFA-207ENST00000413642 CELF6Q96J87 481 aaKnown RBP26.78■■□□□ 1.88
VEGFA-207ENST00000413642 A0A1W2PQU0 124 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 EEF2KO00418 725 aaKnown RBP26.77■■□□□ 1.88
VEGFA-207ENST00000413642 ZNF883P0CG24 379 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 SERINC3Q13530 473 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 ZNF423Q2M1K9 1284 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 NAPEPLDQ6IQ20 393 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 BTBD6Q96KE9 485 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 HDAC8Q9BY41 377 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 PREBQ9HCU5 417 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 MRPL47Q9HD33 250 aaKnown RBP26.77■■□□□ 1.88
VEGFA-207ENST00000413642 ANGPTL2Q9UKU9 493 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 BTBD3Q9Y2F9 522 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 CACNA1EQ15878 2313 aa26.77■■□□□ 1.88
VEGFA-207ENST00000413642 CXorf51AA0A1B0GTR3 108 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 FGF10O15520 208 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-207ENST00000413642 PRPSAP2O60256 369 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 CBFA2T3O75081 653 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 TMCC1O94876 653 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 PRLRP16471 622 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 IL1R2P27930 398 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 GEMIN4P57678 1058 aaKnown RBP26.76■■□□□ 1.87
VEGFA-207ENST00000413642 YBEYP58557 167 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-207ENST00000413642 TRIP6Q15654 476 aaKnown RBP26.76■■□□□ 1.87
VEGFA-207ENST00000413642 PPP6R3Q5H9R7 873 aaPredicted RBP26.76■■□□□ 1.87
VEGFA-207ENST00000413642 OR2AP1Q8NGE2 309 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 ARHGEF26Q96DR7 871 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 IQCDQ96DY2 449 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 MYOCQ99972 504 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 PCOLCE2Q9UKZ9 415 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 WASF3Q9UPY6 502 aa26.76■■□□□ 1.87
VEGFA-207ENST00000413642 PLXNA2O75051 1894 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 KRIT1O00522 736 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 SLC31A1O15431 190 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 GSRP00390 522 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 ITGB7P26010 798 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 MYLK3Q32MK0 819 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 SEL1L3Q68CR1 1132 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 DBX2Q6ZNG2 339 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 RFX8Q6ZV50 586 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 PARS2Q7L3T8 475 aaKnown RBP26.75■■□□□ 1.87
VEGFA-207ENST00000413642 VPS36Q86VN1 386 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 PLPP6Q8IY26 295 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 PPP1R16AQ96I34 528 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 SLC39A8Q9C0K1 460 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 LRRC19Q9H756 370 aa26.75■■□□□ 1.87
VEGFA-207ENST00000413642 TPX2Q9ULW0 747 aaKnown RBP26.75■■□□□ 1.87
VEGFA-207ENST00000413642 ZFR2Q9UPR6 939 aaKnown RBP26.75■■□□□ 1.87
VEGFA-207ENST00000413642 J3KR12 359 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 PCDH8O95206 1070 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 NEK3P51956 506 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 SNRPD1P62314 119 aaKnown RBP26.74■■□□□ 1.87
VEGFA-207ENST00000413642 CYTH1Q15438 398 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 SHBQ15464 509 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 ZNF284Q2VY69 593 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 PARP15Q460N3 678 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 CCDC122Q5T0U0 273 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 HORMAD1Q86X24 394 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 FZD3Q9NPG1 666 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 PCDHB9Q9Y5E1 797 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 PCDHGB2Q9Y5G2 931 aa26.74■■□□□ 1.87
VEGFA-207ENST00000413642 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP26.74■■□□□ 1.875e-11■■■□□ 15.1
VEGFA-207ENST00000413642 ZSCAN5CA6NGD5 496 aaPredicted RBP26.73■■□□□ 1.87
VEGFA-207ENST00000413642 TLR4O00206 839 aa26.73■■□□□ 1.87
VEGFA-207ENST00000413642 DAPK3O43293 454 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms