RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 AP4E1Q9UPM8 1137 aa10.37□□□□□ -0.75
NCKIPSD-202ENST00000413374 WASF2Q9Y6W5 498 aa10.37□□□□□ -0.75
NCKIPSD-202ENST00000413374 SPAG17Q6Q759 2223 aa10.37□□□□□ -0.75
NCKIPSD-202ENST00000413374 A0A087X0T9 212 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 A0A1W2PQJ5 194 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 A0A1W2PR77 199 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 UPK3BL1B0FP48 263 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 UPK3BL2E5RIL1 263 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 EEF2KO00418 725 aaKnown RBP10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 VILLO15195 856 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 SLC7A4O43246 635 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 HYAL3O43820 417 aaPredicted RBP10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 PRPSAP2O60256 369 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 GYPCP04921 128 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 FAM228BP0C875 321 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 TCF4P15884 667 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 ETFBP38117 255 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 CTSKP43235 329 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 SLC14A1Q13336 389 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 MAPK8IP2Q13387 824 aaPredicted RBP10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 STAT4Q14765 748 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 MYLK3Q32MK0 819 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 CCDC157Q569K6 752 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 PPP6R3Q5H9R7 873 aaPredicted RBP10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 CCDC122Q5T0U0 273 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 SEL1L3Q68CR1 1132 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 FBXL19Q6PCT2 694 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 GATAD2AQ86YP4 633 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 CHCHD4Q8N4Q1 142 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 ARHGEF26Q96DR7 871 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 CEP44Q9C0F1 390 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 SLC39A8Q9C0K1 460 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 MRPL47Q9HD33 250 aaKnown RBP10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 BTBD3Q9Y2F9 522 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 BZW2Q9Y6E2 419 aaKnown RBP10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 SCINQ9Y6U3 715 aa10.36□□□□□ -0.75
NCKIPSD-202ENST00000413374 J3KR12 359 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 TLR4O00206 839 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 INSIG1O15503 277 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 LRCH4O75427 683 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 TMCC1O94876 653 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 MYBL1P10243 752 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 ERCC2P18074 760 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 ITIH2P19823 946 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 IL1R2P27930 398 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 EIF4A3P38919 411 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SSR1P43307 286 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 PAPOLAP51003 745 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 NEK3P51956 506 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 AIF1P55008 147 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 CLDN2P57739 230 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 RHOAP61586 193 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SNRPD1P62314 119 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 BNIP3Q12983 259 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SERINC3Q13530 473 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SUZ12Q15022 739 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 CYTH1Q15438 398 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SMTNL2Q2TAL5 461 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 LRRC73Q5JTD7 316 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 NAPEPLDQ6IQ20 393 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 PARS2Q7L3T8 475 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 VPS36Q86VN1 386 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 TP53INP2Q8IXH6 220 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 OR2AP1Q8NGE2 309 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 HSPH1Q92598 858 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SYN2Q92777 582 aaPredicted RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 FAM131CQ96AQ9 280 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 SKA1Q96BD8 255 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 TRIM11Q96F44 468 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 PPP1R16AQ96I34 528 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 EXOC2Q96KP1 924 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 KLHL32Q96NJ5 620 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 ELF4Q99607 663 aaPredicted RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 KDM4CQ9H3R0 1056 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 RETREG1Q9H6L5 497 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 CAAP1Q9H8G2 361 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 PREBQ9HCU5 417 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 PCOLCE2Q9UKZ9 415 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 ZFR2Q9UPR6 939 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 LAMA1P25391 3075 aa10.35□□□□□ -0.75
NCKIPSD-202ENST00000413374 CKAP5Q14008 2032 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 NUP205Q92621 2012 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 C16orf96A6NNT2 1141 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 WASH4PA8MWX3 477 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 C10orf142B7Z368 130 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 PRAMEF26H0Y7S4 382 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 DFFAO00273 331 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 FGF10O15520 208 aaPredicted RBP10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 LATO43561 262 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 POP4O95707 220 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 PAK4O96013 591 aaPredicted RBP10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 UGT2B4P06133 528 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 TPM3P06753 285 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 ITGAVP06756 1048 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 ADRB3P13945 408 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 AMPD1P23109 780 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 CCT8P50990 548 aa10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 GEMIN4P57678 1058 aaKnown RBP10.34□□□□□ -0.75
NCKIPSD-202ENST00000413374 NXPH1P58417 271 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms