RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 DCAF6Q58WW2 860 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 GLRA4Q5JXX5 417 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 CHSY3Q70JA7 882 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 PIWIL4Q7Z3Z4 852 aaKnown RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 CENPLQ8N0S6 344 aaPredicted RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 LRRC43Q8N309 656 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 KCTD4Q8WVF5 259 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 COPS5Q92905 334 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 FAR2Q96K12 515 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 SNX27Q96L92 541 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 PPP1R16BQ96T49 567 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 VAT1Q99536 393 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 KIFC1Q9BW19 673 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 MRM3Q9HC36 420 aaKnown RBP17.87■□□□□ 0.45
SDCBP-202ENST00000413219 CHRAC1Q9NRG0 131 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 ACOT9Q9Y305 439 aa17.87■□□□□ 0.45
SDCBP-202ENST00000413219 TCRBV3S1A0A5B6 114 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 TRIM24O15164 1050 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 PHGDHO43175 533 aaKnown RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 VTNP04004 478 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 COL1A2P08123 1366 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 CD68P34810 354 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 SCN1AP35498 2009 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 DNAJB13P59910 316 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 PPIL2Q13356 520 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 CYTH1Q15438 398 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 CROCCP3Q8IVE0 287 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 TP53INP2Q8IXH6 220 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 NTAN1Q96AB6 310 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 MARK4Q96L34 752 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 ZMAT2Q96NC0 199 aaKnown RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 EFHD1Q9BUP0 239 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 TMPRSS4Q9NRS4 437 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 RALGAPA2Q2PPJ7 1873 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 HEATR9A2RTY3 570 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 PSMD3O43242 534 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 BMP10O95393 424 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 TXNP10599 105 aaKnown RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 ERCC2P18074 760 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 GNL1P36915 607 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 ATXN3P54252 364 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 CDH17Q12864 832 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 SLC2A14Q8TDB8 520 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 WNT8BQ93098 351 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 HDAC11Q96DB2 347 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 RMND5BQ96G75 393 aaPredicted RBP17.86■□□□□ 0.45
SDCBP-202ENST00000413219 SLC2A13Q96QE2 648 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 FTHL17Q9BXU8 183 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 ANKRD60Q9BZ19 345 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 ACSS2Q9NR19 701 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 NCKIPSDQ9NZQ3 722 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 XPR1Q9UBH6 696 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 TUBGCP4Q9UGJ1 667 aa17.86■□□□□ 0.45
SDCBP-202ENST00000413219 KCNU1A8MYU2 1149 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 M0QYT0 321 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 IRF6O14896 467 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 SLC25A27O95847 323 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 PDGFRBP09619 1106 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 TCN1P20061 433 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 NMBRP28336 390 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 GLRBP48167 497 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 KPNA2P52292 529 aaKnown RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 PITX1P78337 314 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 SCAPQ12770 1279 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 SEMA3BQ13214 749 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 PDAP1Q13442 181 aaKnown RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 LRP8Q14114 963 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 SQLEQ14534 574 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 PSMD5Q16401 504 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 NRF1Q16656 503 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 C9orf57Q5W0N0 161 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 NAPEPLDQ6IQ20 393 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 GK5Q6ZS86 529 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 LPCAT2Q7L5N7 544 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 CNTN4Q8IWV2 1026 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 FBXO16Q8IX29 292 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 KLHL23Q8NBE8 558 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 FAM156AQ8NDB6 213 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 LRTOMTQ8WZ04 291 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 GPR78Q96P69 363 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 TRPV6Q9H1D0 765 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 MRPL46Q9H2W6 279 aaKnown RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 OLAHQ9NV23 265 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 TUBA8Q9NY65 449 aaPredicted RBP17.85■□□□□ 0.45
SDCBP-202ENST00000413219 SLC8A2Q9UPR5 921 aa17.85■□□□□ 0.45
SDCBP-202ENST00000413219 E7ENX8 843 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 HCRTO43612 131 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 ADRA1BP35368 520 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 RAB10P61026 200 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 ADIGQ0VDE8 80 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 TTLL4Q14679 1199 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 KRT80Q6KB66 452 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 POTEHQ6S545 545 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 HACD2Q6Y1H2 254 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 LINC00523Q86TU6 105 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 PIGZQ86VD9 579 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 KLHDC8BQ8IXV7 354 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 AFAP1L2Q8N4X5 818 aa17.84■□□□□ 0.45
SDCBP-202ENST00000413219 ZSCAN18Q8TBC5 510 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-202ENST00000413219 LPGAT1Q92604 370 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms