RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 LNX1Q8TBB1 728 aaPredicted RBP25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 PCDHGC5Q9Y5F6 944 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 GRM3Q14832 879 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 IL17AQ16552 155 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 GET4Q7L5D6 327 aaPredicted RBP25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 SLC41A1Q8IVJ1 513 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 GRM6O15303 877 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 ZNHIT3Q15649 155 aaPredicted RBP25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 PFKFB4Q16877 469 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 PRDM12Q9H4Q4 367 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 TBC1D23Q9NUY8 699 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 ATAD3AQ9NVI7 634 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 MAPRE3Q9UPY8 281 aa25.34■■□□□ 1.65
SPIRE1-202ENST00000409402 CACNB4O00305 520 aaPredicted RBP25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 MRASO14807 208 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 SEPT4O43236 478 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 TREHO43280 583 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 EIF2S1P05198 315 aaKnown RBP25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 PTPN4P29074 926 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 ANKRD49Q8WVL7 239 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 FAIM2Q9BWQ8 316 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 RIPK3Q9Y572 518 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 SMIM28A0A1B0GU29 152 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 CCDC189A1A4V9 331 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 MRPS15P82914 257 aaKnown RBP25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 POMGNT2Q8NAT1 580 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 MCCC1Q96RQ3 725 aaPredicted RBP25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 PCDHA2Q9Y5H9 948 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 NCANO14594 1321 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 CCR4P51679 360 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 ACTRT2Q8TDY3 377 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 ENOPH1Q9UHY7 261 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 POLR1DQ9Y2S0 133 aa25.33■■□□□ 1.65
SPIRE1-202ENST00000409402 FAM237AA0A1B0GTK4 181 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 URADA6NGE7 173 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 FASP25445 335 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 SOX6P35712 828 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 IRX1P78414 480 aaPredicted RBP25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 TSHZ1Q6ZSZ6 1077 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 POLNQ7Z5Q5 900 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 FGD2Q7Z6J4 655 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 SMG7Q92540 1137 aaKnown RBP25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 PROX1Q92786 737 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 SEPHS2Q99611 448 aa25.33■■□□□ 1.64
SPIRE1-202ENST00000409402 ALADP13716 330 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 ETS1P14921 441 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 C1DQ13901 141 aaKnown RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 TOMM20Q15388 145 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 SHROOM1Q2M3G4 852 aaPredicted RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 MIIPQ5JXC2 388 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 CERS2Q96G23 380 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 MAML3Q96JK9 1138 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 ERCC2P18074 760 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 LPOP22079 712 aaPredicted RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 NAA20P61599 178 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 ALLCQ8N6M5 410 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 RERGQ96A58 199 aaPredicted RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 FCRL2Q96LA5 508 aaPredicted RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 BATF3Q9NR55 127 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 EPN2O95208 641 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 IFNGR2P38484 337 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 ZBTB49Q6ZSB9 765 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 DHFR2Q86XF0 187 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 A0A0B4J269 797 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 AGRPO00253 132 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 CCDC166P0CW27 439 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 ATP6V1B1P15313 513 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 CASP12Q6UXS9 341 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 NAT16Q8N8M0 369 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 MTMR14Q8NCE2 650 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 UTP15Q8TED0 518 aaKnown RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 C15orf38-AP3S2A0A0A6YYH1 394 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 TK2O00142 265 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 B4GALT4O60513 344 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 DNAJC14Q6Y2X3 702 aaPredicted RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 ARPINQ7Z6K5 226 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 C7orf61Q8IZ16 206 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 CYP4X1Q8N118 509 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 RXFP1Q9HBX9 757 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 NOD2Q9HC29 1040 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 GDF3Q9NR23 364 aa25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 COPG1Q9Y678 874 aaKnown RBP25.32■■□□□ 1.64
SPIRE1-202ENST00000409402 A0A1W2PQH9 124 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 ADRA1DP25100 572 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 MPPE1Q53F39 396 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 ATAT1Q5SQI0 421 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 OTOP2Q7RTS6 562 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 EID3Q8N140 333 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 ANKZF1Q9H8Y5 726 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 CCL16O15467 120 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 SLC35G4P0C7Q5 338 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 HYIQ5T013 277 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 C12orf56Q8IXR9 622 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 OXNAD1Q96HP4 312 aaPredicted RBP25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 DEPDC7Q96QD5 511 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 AP3M1Q9Y2T2 418 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 ADGRB2O60241 1585 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 OPLAHO14841 1288 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 FKBP6O75344 327 aa25.31■■□□□ 1.64
SPIRE1-202ENST00000409402 ELFN1P0C7U0 828 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms