RNA–Protein interactions for RNA: ENST00000406659.3

DNMT3A-206, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 1 (best) BASIC

Gene DNMT3A, Length 1,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-206ENST00000406659 VPS45Q9NRW7 570 aa25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 MTO1Q9Y2Z2 717 aaKnown RBP25.02■■□□□ 1.6
DNMT3A-206ENST00000406659 COL4A6Q14031 1691 aa25.01■■□□□ 1.6
DNMT3A-206ENST00000406659 TGDSO95455 350 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 ACVRL1P37023 503 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 IRX4P78413 519 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 TNK2Q07912 1038 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 C5orf22Q49AR2 442 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 SLC25A41Q8N5S1 370 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 ISL2Q96A47 359 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 PLD4Q96BZ4 506 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 MYRFLQ96LU7 910 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 RETREG1Q9H6L5 497 aa25.01■■□□□ 1.59
DNMT3A-206ENST00000406659 CCDC195A0A1B0GUA6 201 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 GOLGA8TH3BQL2 631 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 URODP06132 367 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 SLC6A4P31645 630 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 ELF1P32519 619 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 ETFBP38117 255 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 DSC2Q02487 901 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 BNIP1Q12981 228 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 SEPT6Q14141 434 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 LBRQ14739 615 aaKnown RBP25■■□□□ 1.59
DNMT3A-206ENST00000406659 DBN1Q16643 649 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 PPM1JQ5JR12 505 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 RABGAP1LQ5R372 815 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 DENND1CQ8IV53 801 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 RFWD2Q8NHY2 731 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 ZNF333Q96JL9 665 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 LRRC37BQ96QE4 947 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 ARNT2Q9HBZ2 717 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 DCTN4Q9UJW0 460 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 PRRG1O14668 218 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 PRAMEF11O60813 436 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 MPOP05164 745 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 PAMP19021 973 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 MAGEA12P43365 314 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 CHRNA4P43681 627 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 PLD1Q13393 1074 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 RAB33AQ14088 237 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 ESRP1Q6NXG1 681 aaKnown RBP25■■□□□ 1.59
DNMT3A-206ENST00000406659 CMC1Q7Z7K0 106 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 CMTR2Q8IYT2 770 aaKnown RBP25■■□□□ 1.59
DNMT3A-206ENST00000406659 ECT2Q9H8V3 914 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 EMCNQ9ULC0 261 aa25■■□□□ 1.59
DNMT3A-206ENST00000406659 PLIN3O60664 434 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 VAPBO95292 243 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 F7P08709 466 aaPredicted RBP24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 HADHAP40939 763 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 BST1Q10588 318 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 TMCO4Q5TGY1 634 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 ARMC3Q5W041 872 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 CCDC91Q7Z6B0 441 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 DDX53Q86TM3 631 aaKnown RBP24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 PPP1R14CQ8TAE6 165 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 TRMT2BQ96GJ1 504 aaKnown RBP24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 PRKD2Q9BZL6 878 aa24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 ZFP37Q9Y6Q3 630 aaPredicted RBP24.99■■□□□ 1.59
DNMT3A-206ENST00000406659 CARNS1A5YM72 827 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 TIMP1P01033 207 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 MMP2P08253 660 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 CSF2RAP15509 400 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 ABCG1P45844 678 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 SERPINH1P50454 418 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 CDH4P55283 916 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 LRRC26Q2I0M4 334 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 FASTKD1Q53R41 847 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 NLRP9Q7RTR0 991 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 VPS39Q96JC1 886 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 MYLK2Q9H1R3 596 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 MAGEH1Q9H213 219 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 C11orf49Q9H6J7 331 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 RC3H2Q9HBD1 1191 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 ATP13A1Q9HD20 1204 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 CHKBQ9Y259 395 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 EFCAB14O75071 495 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 STC2O76061 302 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 CORO1AP31146 461 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 WDR5P61964 334 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 STX3Q13277 289 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 THOC5Q13769 683 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 ZNF235Q14590 738 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 UGP2Q16851 508 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 PGBD5Q8N414 524 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 PAWRQ96IZ0 340 aaKnown RBP24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 C7orf26Q96N11 449 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 ZNF599Q96NL3 588 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 MCMBPQ9BTE3 642 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 GKN1Q9NS71 199 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 SLC2A6Q9UGQ3 507 aa24.98■■□□□ 1.59
DNMT3A-206ENST00000406659 A0A0G2JND7 137 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 HEATR9A2RTY3 570 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 PROCP04070 461 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 PPP3CCP48454 512 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 ARFIP2P53365 341 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 GNA12Q03113 381 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 TWF1Q12792 350 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 CNGA3Q16281 694 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 ANKLE1Q8NAG6 615 aa24.97■■□□□ 1.59
DNMT3A-206ENST00000406659 AUTS2Q8WXX7 1259 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms