RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 ALDOAP04075 364 aaKnown RBP16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 AOC1P19801 751 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 MGAT1P26572 445 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CPA2P48052 419 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SESN3P58005 492 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 RCN2Q14257 317 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 PIGZQ86VD9 579 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 APLFQ8IW19 511 aaPredicted RBP16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 SCUBE1Q8IWY4 988 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 DEFB106AQ8N104 65 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 RNF139Q8WU17 664 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 KCTD13Q8WZ19 329 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 P2RY11Q96G91 374 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 CEP295NLQ96MC4 621 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 FAM161BQ96MY7 647 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 C20orf27Q9GZN8 174 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 C1orf21Q9H246 121 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 LMCD1Q9NZU5 365 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 ANGPTL2Q9UKU9 493 aa16.21■□□□□ 0.19
CHRFAM7A-203ENST00000401522 COL4A4P53420 1690 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 HHLA1C9JL84 531 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GLUD1P00367 558 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SERPINE1P05121 402 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FGF3P11487 239 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PAX7P23759 505 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GRK2P25098 689 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CDC25CP30307 473 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GARSP41250 739 aaKnown RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ALDH18A1P54886 795 aaKnown RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SESN2P58004 480 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 AP1B1Q10567 949 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 THOC5Q13769 683 aaKnown RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PDE1CQ14123 709 aaPredicted RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MGAT5BQ3V5L5 792 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TEDDM1Q5T9Z0 273 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ZCCHC23Q6ZST2 131 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PPFIBP2Q8ND30 876 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PIWIL2Q8TC59 973 aaKnown RBP16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CYP4F11Q9HBI6 524 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 IGSF9Q9P2J2 1179 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FBXW11Q9UKB1 542 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 LRCH1Q9Y2L9 728 aa16.2■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TBX10O75333 385 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KLHL2O95198 593 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ITGA2BP08514 1039 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NOS2P35228 1153 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC1A6P48664 564 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RPL10AP62906 217 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KLC1Q07866 573 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 GRIN2CQ14957 1233 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PAFAH1B3Q15102 231 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DDR2Q16832 855 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RAB41Q5JT25 222 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SPANXN3Q5MJ09 141 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RTL10Q7L3V2 364 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 BNIPLQ7Z465 357 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ADGRD2Q7Z7M1 963 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RASSF3Q86WH2 238 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SCN4BQ8IWT1 228 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 UNC5BQ8IZJ1 945 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SLC22A17Q8WUG5 538 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NRG4Q8WWG1 115 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NT5C3BQ969T7 300 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SPDL1Q96EA4 605 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SPATA17Q96L03 361 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SEPT5Q99719 369 aaPredicted RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 STAP1Q9ULZ2 295 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 DNAJC16Q9Y2G8 782 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ATG2AQ2TAZ0 1938 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PER2O15055 1255 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TOP3BO95985 862 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 POLBP06746 335 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SPATA31D3P0C874 917 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PSMB4P28070 264 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 IRX4P78413 519 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CRADDP78560 199 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PDE1BQ01064 536 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KDSRQ06136 332 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ADIGQ0VDE8 80 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 IFRD2Q12894 506 aaPredicted RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 LBRQ14739 615 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 IRGCQ6NXR0 463 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 C16orf46Q6P387 395 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SPATA31D4Q6ZUB0 917 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 ULK2Q8IYT8 1036 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 KREMEN2Q8NCW0 462 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PPP4R1Q8TF05 950 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SCG3Q8WXD2 468 aaKnown RBP16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 FAM149B1Q96BN6 582 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 NPY6RQ99463 290 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 CPNE1Q99829 537 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 SYBUQ9NX95 663 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TXNDC16Q9P2K2 825 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 RAD54BQ9Y620 910 aa16.19■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PRR5-ARHGAP8B1AHC4 643 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 F5H423 210 aaPredicted RBP16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 PRRG1O14668 218 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 TNFRSF10BO14763 440 aa16.18■□□□□ 0.18
CHRFAM7A-203ENST00000401522 MAP3K7O43318 606 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms