RNA–Protein interactions for RNA: ENST00000398959.2

SRMP1-201, Transcript of spermidine synthase pseudogene 1, humanhuman

BASIC

Gene SRMP1, Length 885 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRMP1-201ENST00000398959 NEMP2A6NFY4 417 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 ZNF821O75541 412 aaPredicted RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 MT-CO3P00414 261 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 MMEP08473 750 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 UCHL3P15374 230 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 L1CAMP32004 1257 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 ACTN2P35609 894 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 CCNHP51946 323 aaPredicted RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 ARF5P84085 180 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 ATP11AP98196 1134 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 SLC20A2Q08357 652 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 CDO1Q16878 200 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 DPCR1Q3MIW9 517 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 ARL13BQ3SXY8 428 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 TMEM259Q4ZIN3 620 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 CARD16Q5EG05 197 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 NAA35Q5VZE5 725 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 TRNP1Q6NT89 227 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 DPY19L2P1Q6NXN4 242 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 Q6ZSR6 202 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 ABI3BPQ7Z7G0 1075 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 NOP9Q86U38 636 aaKnown RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 DCP2Q8IU60 420 aaKnown RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 SLC22A18ASQ8N1D0 253 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 RYBPQ8N488 228 aaPredicted RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 DCBLD1Q8N8Z6 715 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 SNIP1Q8TAD8 396 aaKnown RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 FGF11Q92914 225 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 IFT43Q96FT9 208 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 APOLD1Q96LR9 279 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 UBL7Q96S82 380 aaPredicted RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 SLC17A9Q9BYT1 436 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 METTL5Q9NRN9 209 aaKnown RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 EVA1BQ9NVM1 165 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 NLGN3Q9NZ94 848 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 PPARGC1AQ9UBK2 798 aaKnown RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 TMEM59LQ9UK28 342 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 FCF1Q9Y324 198 aaKnown RBP11.34□□□□□ -0.59
SRMP1-201ENST00000398959 HS3ST3A1Q9Y663 406 aa11.34□□□□□ -0.59
SRMP1-201ENST00000398959 F8VZ95 297 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 H3BM21 787 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 NEMP1O14524 444 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ZMPSTE24O75844 475 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 PAK4O96013 591 aaPredicted RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 CKMT1AP12532 417 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ERCC5P28715 1186 aaPredicted RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ETFBP38117 255 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 DUSP3P51452 185 aaPredicted RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 HNRNPKP61978 463 aaKnown RBP eCLIP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 NOMO3P69849 1222 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 CCDC173Q0VFZ6 552 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 SGCGQ13326 291 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ZNF542PQ5EBM4 170 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 RWDD4Q6NW29 188 aaKnown RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 KYAT3Q6YP21 454 aaKnown RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 PARS2Q7L3T8 475 aaKnown RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ARCQ7LC44 396 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 BNIPLQ7Z465 357 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 EMC1Q8N766 993 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 FCRL3Q96P31 734 aaPredicted RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 DEPDC7Q96QD5 511 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 DUSP23Q9BVJ7 150 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 NAA15Q9BXJ9 866 aaKnown RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 STK33Q9BYT3 514 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 TM6SF2Q9BZW4 377 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ABCG4Q9H172 646 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 CLSTN2Q9H4D0 955 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 CAAP1Q9H8G2 361 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 ZNF212Q9UDV6 495 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 OR12D3Q9UGF7 316 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 IPO11Q9UI26 975 aaKnown RBP11.33□□□□□ -0.6
SRMP1-201ENST00000398959 HPCAL4Q9UM19 191 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 FADS3Q9Y5Q0 445 aa11.33□□□□□ -0.6
SRMP1-201ENST00000398959 POM121BA6NF01 834 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 FPGTO14772 594 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 SCAMP1O15126 338 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 AP1G1O43747 822 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 OPA1O60313 960 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 NEBLO76041 1014 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 SDC4P31431 198 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 RABIFP47224 123 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 GEMIN4P57678 1058 aaKnown RBP11.32□□□□□ -0.6
SRMP1-201ENST00000398959 FGL2Q14314 439 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 POLD3Q15054 466 aaPredicted RBP11.32□□□□□ -0.6
SRMP1-201ENST00000398959 C15orf59Q2T9L4 293 aaPredicted RBP11.32□□□□□ -0.6
SRMP1-201ENST00000398959 TBC1D25Q3MII6 688 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 TCP11X2Q5H9J9 407 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 ARTNQ5T4W7 220 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 ZSCAN30Q86W11 494 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 PARGQ86W56 976 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 ZNF677Q86XU0 584 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 OR6K2Q8NGY2 324 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 EPS8L1Q8TE68 723 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 ISG20Q96AZ6 181 aaKnown RBP11.32□□□□□ -0.6
SRMP1-201ENST00000398959 BMFQ96LC9 184 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 OSBPL2Q9H1P3 480 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 PRORYQ9H606 182 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 USP29Q9HBJ7 922 aa11.32□□□□□ -0.6
SRMP1-201ENST00000398959 SAMSN1Q9NSI8 373 aaKnown RBP11.32□□□□□ -0.6
SRMP1-201ENST00000398959 DNAI1Q9UI46 699 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms