RNA–Protein interactions for RNA: ENST00000398541.2

RPS4XP3-201, Transcript of ribosomal protein S4X pseudogene 3, humanhuman

BASIC

Gene RPS4XP3, Length 413 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP3-201ENST00000398541 CDCA5Q96FF9 252 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ERO1AQ96HE7 468 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ADOQ96SZ5 270 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 DPYSL5Q9BPU6 564 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CLSTN3Q9BQT9 956 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CCDC106Q9BWC9 280 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 IMPG2Q9BZV3 1241 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CLPBQ9H078 707 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 HSD3B7Q9H2F3 369 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 C12orf65Q9H3J6 166 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 EPHX3Q9H6B9 360 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CXorf36Q9H7Y0 433 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 NRDE2Q9H7Z3 1164 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 FBRSL1Q9HCM7 1045 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZBTB40Q9NUA8 1239 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 NINJ2Q9NZG7 142 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CGNQ9P2M7 1197 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 AMACRQ9UHK6 382 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 CPSF3Q9UKF6 684 aaKnown RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 APPL1Q9UKG1 709 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 MKLN1Q9UL63 735 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 HPCAL4Q9UM19 191 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 AURKCQ9UQB9 309 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 UBE2J1Q9Y385 318 aaPredicted RBP3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 PCDHB7Q9Y5E2 793 aa3.37□□□□□ -1.87
RPS4XP3-201ENST00000398541 LOC100509620A0A075B734 347 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CDHR4A6H8M9 788 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ENO4A6NNW6 628 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 A8MVJ9 347 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ADM5C9JUS6 153 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CCDC188H7C350 402 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 AGPSO00116 658 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 GRM8O00222 908 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 MATN2O00339 956 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ADAMDEC1O15204 470 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 NKX2-8O15522 239 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 VPS4BO75351 444 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 RAD17O75943 681 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 TRIM16O95361 564 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 OPN1MWP04001 364 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 INHBAP08476 426 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CCDC159P0C7I6 412 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 OPN1MW2P0DN77 364 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 OPN1MW3P0DN78 364 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 SRCP12931 536 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 FERP16591 822 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 HK1P19367 917 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 AGAP20933 346 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 IL15P40933 162 aaPredicted RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 MEOX1P50221 254 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 TOB1P50616 345 aaPredicted RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF81P51508 661 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CCR3P51677 355 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF134P52741 427 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CAPZA1P52907 286 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 PRKAG1P54619 331 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 RPL15P61313 204 aaKnown RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 COX10Q12887 443 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 NPRL3Q12980 569 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 TMED1Q13445 227 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 NFYCQ13952 458 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 FRG1Q14331 258 aaKnown RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ACOX1Q15067 660 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 PCOLCEQ15113 449 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 PRKD1Q15139 912 aaPredicted RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 TRADDQ15628 312 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 MYLK3Q32MK0 819 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CEP55Q53EZ4 464 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF667Q5HYK9 610 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CERCAMQ5T4B2 595 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 AGBL4Q5VU57 503 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ANKRD40Q6AI12 368 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CCDC144NLQ6NUI1 221 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 DRICH1Q6PGQ1 229 aaPredicted RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 MEX3BQ6ZN04 569 aaKnown RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 USP30Q70CQ3 517 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 GPRIN1Q7Z2K8 1008 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC46A3Q7Z3Q1 461 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 KRT27Q7Z3Y8 459 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 HOOK3Q86VS8 718 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CNTN4Q8IWV2 1026 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM185AQ8N0U4 392 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 Q8N1X5 172 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 FSTL5Q8N475 847 aaPredicted RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 PI4KAP1Q8N8J0 262 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CNNM3Q8NE01 707 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 SLC35B2Q8TB61 432 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 RAB40AQ8WXH6 277 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 CNOT9Q92600 299 aaKnown RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 PPP2R3CQ969Q6 453 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 PHACTR3Q96KR7 559 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 NLRP4Q96MN2 994 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 OR14A2Q96R54 314 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 EIF3CQ99613 913 aaKnown RBP3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 NPAS1Q99742 590 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 FAM118BQ9BPY3 351 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 FERMT1Q9BQL6 677 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 MGME1Q9BQP7 344 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 ZNF747Q9BV97 191 aa3.36□□□□□ -1.87
RPS4XP3-201ENST00000398541 KIFC3Q9BVG8 833 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms