RNA–Protein interactions for RNA: ENST00000398431.2

TFF3-202, Transcript of trefoil factor 3, humanhuman

TSL 3

Gene TFF3, Length 452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-202ENST00000398431 SPINT1O43278 529 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 F9P00740 461 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 GP1BAP07359 652 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 OR1E1P30953 314 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 L1CAMP32004 1257 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 FLT3P36888 993 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 LSSP48449 732 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 SULT1E1P49888 294 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 CXADRP78310 365 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 ARF5P84085 180 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 DEUP1Q05D60 604 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 SLC25A52Q3SY17 297 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 CARD16Q5EG05 197 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 DCP2Q8IU60 420 aaKnown RBP12.28□□□□□ -0.44
TFF3-202ENST00000398431 ZDHHC17Q8IUH5 632 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 ZNF248Q8NDW4 579 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 FAM174AQ8TBP5 190 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 NAF1Q96HR8 494 aaKnown RBP12.28□□□□□ -0.44
TFF3-202ENST00000398431 FEM1CQ96JP0 617 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 CCDC114Q96M63 670 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 ZNF578Q96N58 590 aaPredicted RBP12.28□□□□□ -0.44
TFF3-202ENST00000398431 HEPHQ9BQS7 1158 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 ASCL3Q9NQ33 180 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 TMEM59LQ9UK28 342 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 SSUH2Q9Y2M2 353 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 KALRNO60229 2985 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 RP1P56715 2156 aa12.28□□□□□ -0.44
TFF3-202ENST00000398431 FAM170AA1A519 330 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 NEMP2A6NFY4 417 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 A6NNZ2 444 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 LZTS3O60299 673 aaPredicted RBP12.27□□□□□ -0.45
TFF3-202ENST00000398431 SRGAP2O75044 1071 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 USP12O75317 370 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 CSO75390 466 aaKnown RBP12.27□□□□□ -0.45
TFF3-202ENST00000398431 CSF2P04141 144 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 ADRB3P13945 408 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 PLA2G2AP14555 144 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 TGM2P21980 687 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 ITGB7P26010 798 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 SCNN1AP37088 669 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 SERPINH1P50454 418 aaKnown RBP12.27□□□□□ -0.45
TFF3-202ENST00000398431 NEK3P51956 506 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 SNX16P57768 344 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 GABREP78334 506 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 SLC20A2Q08357 652 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 MAPK8IP2Q13387 824 aaPredicted RBP12.27□□□□□ -0.45
TFF3-202ENST00000398431 RAB6CQ53S08 254 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 C2CD6Q53TS8 623 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 XYLT1Q86Y38 959 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 C18orf8Q96DM3 657 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 DEPDC7Q96QD5 511 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 HAPLN3Q96S86 360 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 SPON2Q9BUD6 331 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 C1QTNF2Q9BXJ5 285 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 MAGEB5Q9BZ81 275 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 SYNCQ9H7C4 482 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 DYRK4Q9NR20 520 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 DNAJC28Q9NX36 388 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 PNMA8BQ9ULN7 279 aaPredicted RBP12.27□□□□□ -0.45
TFF3-202ENST00000398431 STAP1Q9ULZ2 295 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 CSNK1G3Q9Y6M4 447 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 CHD5Q8TDI0 1954 aa12.27□□□□□ -0.45
TFF3-202ENST00000398431 KIF26BQ2KJY2 2108 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 SETXQ7Z333 2677 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 CFAP46Q8IYW2 2715 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 IGLON5A6NGN9 336 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 CASC3O15234 703 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 AP1G1O43747 822 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 ALPPL2P10696 532 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 NME1P15531 152 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 CYP11B1P15538 503 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 GKP32189 559 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 ACVRL1P37023 503 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 DUSP3P51452 185 aaPredicted RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 CCNHP51946 323 aaPredicted RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 ERVPABLB-1P60509 514 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 PFN3P60673 137 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 HNRNPKP61978 463 aaKnown RBP eCLIP12.26□□□□□ -0.45
TFF3-202ENST00000398431 RPS21P63220 83 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 C1QBPQ07021 282 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 EIF2B5Q13144 721 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 ISXQ2M1V0 245 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 HS1BP3Q53T59 392 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 KIAA1161Q6NSJ0 714 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 RETSATQ6NUM9 610 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 LRRC31Q6UY01 552 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 KYAT3Q6YP21 454 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 ZNF783Q6ZMS7 281 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 PARS2Q7L3T8 475 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 PTAR1Q7Z6K3 402 aaPredicted RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 PLPP6Q8IY26 295 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 LSMEM2Q8N112 164 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 PCDH20Q8N6Y1 951 aaKnown RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 TMEM35BQ8NCS4 154 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 ZNF548Q8NEK5 533 aaPredicted RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 IFI44Q8TCB0 444 aa12.26□□□□□ -0.45
TFF3-202ENST00000398431 PRR11Q96HE9 360 aaPredicted RBP12.26□□□□□ -0.45
TFF3-202ENST00000398431 LENG8Q96PV6 779 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms