RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 NEK3P51956 506 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ADKP55263 362 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 KRT83P78385 493 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CENPCQ03188 943 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 LRMPQ12912 555 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CLCA4Q14CN2 919 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 MANEAQ5SRI9 462 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 RBFAQ8N0V3 343 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ATP11CQ8NB49 1132 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ZSCAN1Q8NBB4 408 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 HTR3CQ8WXA8 447 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 PPP1R16AQ96I34 528 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 RPRD1AQ96P16 312 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 C1QTNF2Q9BXJ5 285 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 SLC4A5Q9BY07 1137 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 STRADBQ9C0K7 418 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CLPBQ9H078 707 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ADNPQ9H2P0 1102 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 TCEAL2Q9H3H9 227 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 WDR70Q9NW82 654 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 SEPT10Q9P0V9 454 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 APOBEC3BQ9UH17 382 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 IL36AQ9UHA7 158 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 LRP4O75096 1905 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ZFC3H1O60293 1989 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 DOCK4Q8N1I0 1966 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 D6RAR5 112 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 K7ERQ8 282 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 YY2O15391 372 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 SMAD6O43541 496 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 SNAP91O60641 907 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ANXA6P08133 673 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ADRB3P13945 408 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 HGFP14210 728 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 L1CAMP32004 1257 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CLCN6P51797 869 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 CDH4P55283 916 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 YWHAZP63104 245 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 FOXK1P85037 733 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 DPYDQ12882 1025 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 C1orf61Q13536 156 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 AUHQ13825 339 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 TCERG1LQ5VWI1 586 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ATL3Q6DD88 541 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ESRP1Q6NXG1 681 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 PHACTR4Q8IZ21 702 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 DENND6BQ8NEG7 585 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 ZNF564Q8TBZ8 553 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 STK32AQ8WU08 396 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 GFM1Q96RP9 751 aaKnown RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 LRRC61Q9BV99 259 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 VPS51Q9UID3 782 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 RCOR1Q9UKL0 485 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 PNMA8BQ9ULN7 279 aaPredicted RBP8.61□□□□□ -1.03
SCFD1-202ENST00000396629 HPSEQ9Y251 543 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 MAN2B2Q9Y2E5 1009 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
SCFD1-202ENST00000396629 UNC13CQ8NB66 2214 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 ZNF821O75541 412 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-202ENST00000396629 LEFTY1O75610 366 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 PFKFB1P16118 471 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 RRM1P23921 792 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 ITGB7P26010 798 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 CCR1P32246 355 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 CCL7P80098 99 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 SGCGQ13326 291 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 MTA1Q13330 715 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 PTK2BQ14289 1009 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 PRRT3Q5FWE3 981 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 DCAF17Q5H9S7 520 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-202ENST00000396629 DPY19L3Q6ZPD9 716 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 TMEM110Q86TL2 294 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 VASH2Q86V25 355 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 DTX1Q86Y01 620 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 TMEM74Q96NL1 305 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 PSMG3-AS1Q96PY0 264 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 C2orf49Q9BVC5 232 aaPredicted RBP8.6□□□□□ -1.03
SCFD1-202ENST00000396629 MUC3BQ9H195 1237 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 THAP9Q9H5L6 903 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 SYNDIG1Q9H7V2 258 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 ST7Q9NRC1 585 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 RABGEF1Q9UJ41 708 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 VANGL2Q9ULK5 521 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 HS3ST4Q9Y661 456 aa8.6□□□□□ -1.03
SCFD1-202ENST00000396629 A0A1B0GVL5 298 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 A0A1W2PQM1 296 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 IGLON5A6NGN9 336 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 PMM2O15305 246 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 SLC16A3O15427 465 aaKnown RBP8.59□□□□□ -1.03
SCFD1-202ENST00000396629 TSHRP16473 764 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CMA1P23946 247 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 YPEL5P62699 121 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CYP4F2P78329 520 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 CDK17Q00537 523 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 MEA1Q16626 185 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 DENND1BQ6P3S1 775 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 C22orf39Q6P5X5 142 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 LVRNQ6Q4G3 990 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 ZFAND4Q86XD8 727 aa8.59□□□□□ -1.03
SCFD1-202ENST00000396629 GRIN3AQ8TCU5 1115 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms