RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 TUBA4AP68366 448 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 IFRD2Q12894 506 aaPredicted RBP16.29■□□□□ 0.2
PDE1C-202ENST00000396182 ITGA7Q13683 1181 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 PTK2BQ14289 1009 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 SLC25A52Q3SY17 297 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 C9orf57Q5W0N0 161 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 PTAR1Q7Z6K3 402 aaPredicted RBP16.29■□□□□ 0.2
PDE1C-202ENST00000396182 LZTR1Q8N653 840 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 LRTOMTQ8WZ04 291 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 ASB9Q96DX5 294 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 SNX27Q96L92 541 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 TMEM79Q9BSE2 394 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 DRC3Q9H069 523 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 AP4S1Q9Y587 144 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 ZNF638Q14966 1978 aaKnown RBP16.29■□□□□ 0.2
PDE1C-202ENST00000396182 C9IYK1 514 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 SPTLC1O15269 473 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 SUPT3HO75486 399 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 PIGNO95427 931 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 MPOP05164 745 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 PDAP1Q13442 181 aaKnown RBP16.29■□□□□ 0.2
PDE1C-202ENST00000396182 SPANXN3Q5MJ09 141 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 MARCH8Q5T0T0 291 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 KRT80Q6KB66 452 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 CRYBG2Q8N1P7 616 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 FIBCD1Q8N539 461 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 CNTD1Q8N815 330 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 ACVR1CQ8NER5 493 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 TRPC4APQ8TEL6 797 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 ZNF669Q96BR6 464 aaPredicted RBP16.29■□□□□ 0.2
PDE1C-202ENST00000396182 C16orf70Q9BSU1 422 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 CDYLQ9Y232 598 aa16.29■□□□□ 0.2
PDE1C-202ENST00000396182 TMEM221A6NGB7 291 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 TKTP29401 623 aaKnown RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 SCNN1AP37088 669 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 HK2P52789 917 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 CDH15P55291 814 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 NUP107P57740 925 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 LAMC2Q13753 1193 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 C16orf72Q14CZ0 275 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ARL13AQ5H913 290 aaPredicted RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 NXNQ6DKJ4 435 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ELMSAN1Q6PJG2 1045 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 MAMDC4Q6UXC1 1216 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ARMCX2Q7L311 632 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 MYO1HQ8N1T3 1032 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 LRRC52Q8N7C0 313 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 PLEKHA5Q9HAU0 1116 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 IGSF9Q9P2J2 1179 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 RCOR3Q9P2K3 495 aaPredicted RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 COPG1Q9Y678 874 aaKnown RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 TK2O00142 265 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 PLOD2O00469 737 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 BMP10O95393 424 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 C2P06681 752 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 TFEBP19484 476 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 GRIA4P48058 902 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 PGGT1BP53609 377 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ADIGQ0VDE8 80 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 MTX3Q5HYI7 312 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 TAPT1Q6NXT6 567 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 PIGZQ86VD9 579 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 RNF168Q8IYW5 571 aaPredicted RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 BEST2Q8NFU1 509 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 HM13Q8TCT9 377 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 URGCPQ8TCY9 931 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 STON2Q8WXE9 905 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 SLC29A1Q99808 456 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ACE2Q9BYF1 805 aaPredicted RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 C20orf96Q9NUD7 363 aaPredicted RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ADA2Q9NZK5 511 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 SUCOQ9UBS9 1254 aaKnown RBP16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ZDHHC2Q9UIJ5 367 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 ZNF711Q9Y462 761 aa16.28■□□□□ 0.2
PDE1C-202ENST00000396182 PLXNA1Q9UIW2 1896 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 ZCWPW2A0A1B0GU75 182 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 FAM72CH0Y354 149 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 AKAP5P24588 427 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 NDUFV1P49821 464 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 NME3Q13232 169 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 SLC44A4Q53GD3 710 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 FAM72AQ5TYM5 149 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 SYPL2Q5VXT5 272 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 FAM72DQ6L9T8 149 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 ZYG11AQ6WRX3 759 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 MOB2Q70IA6 237 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 FAM72BQ86X60 149 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 ISOC1Q96CN7 298 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 MFSD3Q96ES6 412 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 HSFY1Q96LI6 401 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 ANKRD60Q9BZ19 345 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 LRRC40Q9H9A6 602 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 CDHR5Q9HBB8 845 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 KLHL8Q9P2G9 620 aaPredicted RBP16.27■□□□□ 0.2
PDE1C-202ENST00000396182 EBF1Q9UH73 591 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 DERAQ9Y315 318 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 PCDHGA7Q9Y5G6 932 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 ZSWIM8A7E2V4 1837 aa16.27■□□□□ 0.2
PDE1C-202ENST00000396182 ADM5C9JUS6 153 aa16.27■□□□□ 0.19
PDE1C-202ENST00000396182 BEST1O76090 585 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms