RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 HOXC10Q9NYD6 342 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.51□□□□□ -0.09
CLIP2-203ENST00000395060 NUP205Q92621 2012 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 RNF103-CHMP3A0A140T963 221 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 SBK3P0C264 359 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 LDLRAP1Q5SW96 308 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 LIPMQ5VYY2 423 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 CLEC6AQ6EIG7 209 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 LRRC43Q8N309 656 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 FNDC8Q8TC99 324 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 C12orf43Q96C57 262 aaKnown RBP14.51□□□□□ -0.09
CLIP2-203ENST00000395060 LRRC40Q9H9A6 602 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 TUBGCP4Q9UGJ1 667 aa14.51□□□□□ -0.09
CLIP2-203ENST00000395060 M0QYT0 321 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 FZD9O00144 591 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 PSMD12O00232 456 aaPredicted RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ARF4P18085 180 aaPredicted RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SLC7A2P52569 658 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 PLCL1Q15111 1095 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 INSCQ1MX18 579 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 GPR141Q7Z602 305 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 PATL1Q86TB9 770 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 LSMEM2Q8N112 164 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CBR4Q8N4T8 237 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 FIBCD1Q8N539 461 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SPATA22Q8NHS9 363 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 FBXL20Q96IG2 436 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 KLK14Q9P0G3 267 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ARID2Q68CP9 1835 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ZCWPW2A0A1B0GU75 182 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 GPC4O75487 556 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ZNF23P17027 643 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CD247P20963 164 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CSE1LP55060 971 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ADIGQ0VDE8 80 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 BNIP3Q12983 259 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 GRM1Q13255 1194 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 MAP7D1Q3KQU3 841 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 FBXO48Q5FWF7 155 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 STXBP5Q5T5C0 1151 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 HMBOX1Q6NT76 420 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CNSTQ6PJW8 725 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 OTOP3Q7RTS5 596 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CEP97Q8IW35 865 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 RBM12BQ8IXT5 1001 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SLC2A14Q8TDB8 520 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 THEGQ9P2T0 379 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CNOT6Q9ULM6 557 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 PCDHGA7Q9Y5G6 932 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 PTGDR2Q9Y5Y4 395 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 TRIM38O00635 465 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 HTRA2O43464 458 aaPredicted RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ATE1O95260 518 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 VARSP26640 1264 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 PRDX6P30041 224 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 YBX1P67809 324 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 VGLL4Q14135 290 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CSHL1Q14406 222 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 CAPRIN1Q14444 709 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SYPL2Q5VXT5 272 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 TMEM26Q6ZUK4 368 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 ERI1Q8IV48 349 aaKnown RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SLC35F5Q8WV83 523 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SLCO4A1Q96BD0 722 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 DRC3Q9H069 523 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 POMKQ9H5K3 350 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 GOLGA2P5Q9HBQ8 144 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 SELENONQ9NZV5 590 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 BCAP29Q9UHQ4 241 aa14.5□□□□□ -0.09
CLIP2-203ENST00000395060 MTF2Q9Y483 593 aaPredicted RBP14.5□□□□□ -0.09
CLIP2-203ENST00000395060 AURKAO14965 403 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 DDNO94850 711 aaPredicted RBP14.49□□□□□ -0.09
CLIP2-203ENST00000395060 JCHAINP01591 159 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 NFKB1P19838 968 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CHRM3P20309 590 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CES1P23141 567 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CXCR3P49682 368 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 TRIM25Q14258 630 aaKnown RBP14.49□□□□□ -0.09
CLIP2-203ENST00000395060 FASTKQ14296 549 aaKnown RBP14.49□□□□□ -0.09
CLIP2-203ENST00000395060 FGD3Q5JSP0 725 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 METTL21CQ5VZV1 264 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CHSY3Q70JA7 882 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CXorf38Q8TB03 319 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 ISOC1Q96CN7 298 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 OTUD5Q96G74 571 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 FZD8Q9H461 694 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CACNG4Q9UBN1 327 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CITO14578 2027 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 EVPLQ92817 2033 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 SOWAHBA6NEL2 793 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 C19orf81C9J6K1 198 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 ADM5C9JUS6 153 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 H3BNH8 94 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 ZNF189O75820 626 aaPredicted RBP14.49□□□□□ -0.09
CLIP2-203ENST00000395060 IL18RAPO95256 599 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 ZFXP17010 805 aaPredicted RBP14.49□□□□□ -0.09
CLIP2-203ENST00000395060 PROZP22891 400 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 NR2C2P49116 596 aa14.49□□□□□ -0.09
CLIP2-203ENST00000395060 CDK9P50750 372 aaKnown RBP14.49□□□□□ -0.09
CLIP2-203ENST00000395060 RBP5P82980 135 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms