RNA–Protein interactions for RNA: ENST00000394991.7

SNCA-205, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCA, Length 1,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-205ENST00000394991 JUNDP17535 347 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 MLLT3P42568 568 aaPredicted RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 RABIFP47224 123 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 NEK3P51956 506 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 CDH4P55283 916 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 KRT83P78385 493 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 NFKB2Q00653 900 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 SRSF6Q13247 344 aaKnown RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 PDCLQ13371 301 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 PDE1CQ14123 709 aaPredicted RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 OTUD1Q5VV17 481 aaPredicted RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 KIAA1161Q6NSJ0 714 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 DPY19L3Q6ZPD9 716 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 ARL14Q8N4G2 192 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 TPCN2Q8NHX9 752 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 ZNF606Q8WXB4 792 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 BOCQ9BWV1 1114 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 ANLNQ9NQW6 1124 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 NCKIPSDQ9NZQ3 722 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 ATXN7L1Q9ULK2 861 aaPredicted RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 PNMA8BQ9ULN7 279 aaPredicted RBP16.16■□□□□ 0.18
SNCA-205ENST00000394991 ZDHHC9Q9Y397 364 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 FADS3Q9Y5Q0 445 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 SNX10Q9Y5X0 201 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 COL12A1Q99715 3063 aa16.16■□□□□ 0.18
SNCA-205ENST00000394991 CCDC187A0A096LP49 1063 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 A0A0D9SEW6 157 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 I6L893 689 aaPredicted RBP16.15■□□□□ 0.18
SNCA-205ENST00000394991 TPP1O14773 563 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 ZNF821O75541 412 aaPredicted RBP16.15■□□□□ 0.18
SNCA-205ENST00000394991 ENDOD1O94919 500 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 LETM1O95202 739 aaPredicted RBP16.15■□□□□ 0.18
SNCA-205ENST00000394991 ITGA2BP08514 1039 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 ADRB3P13945 408 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 RPS21P63220 83 aaKnown RBP16.15■□□□□ 0.18
SNCA-205ENST00000394991 NME3Q13232 169 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 ZNF683Q8IZ20 524 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 DCAF4L2Q8NA75 395 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 EHBP1Q8NDI1 1231 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 CPXM1Q96SM3 734 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 IL12RB2Q99665 862 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 FAM117AQ9C073 453 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 SIK2Q9H0K1 926 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 ASNSD1Q9NWL6 643 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 RMND1Q9NWS8 449 aa16.15■□□□□ 0.18
SNCA-205ENST00000394991 HEMK1Q9Y5R4 338 aaPredicted RBP16.15■□□□□ 0.18
SNCA-205ENST00000394991 BSNQ9UPA5 3926 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 P4HA2O15460 535 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 THAP12O43422 761 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 NOBOXO60393 691 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 HSF2BPO75031 334 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 GCATO75600 419 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 GLI1P08151 1106 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 ITGB7P26010 798 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 CLCN6P51797 869 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 PFN3P60673 137 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 C1orf61Q13536 156 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 CCDC40Q4G0X9 1142 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 C6orf132Q5T0Z8 1188 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 PARS2Q7L3T8 475 aaKnown RBP16.14■□□□□ 0.17
SNCA-205ENST00000394991 B3GNT8Q7Z7M8 397 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 WDTC1Q8N5D0 677 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 PPP1R16AQ96I34 528 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 FEM1CQ96JP0 617 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 CEP63Q96MT8 703 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 CCDC3Q9BQI4 270 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 C1QTNF2Q9BXJ5 285 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 STARD5Q9NSY2 213 aa16.14■□□□□ 0.17
SNCA-205ENST00000394991 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.14■□□□□ 0.17
SNCA-205ENST00000394991 IPO11Q9UI26 975 aaKnown RBP16.14■□□□□ 0.17
SNCA-205ENST00000394991 NTN3O00634 580 aaPredicted RBP16.13■□□□□ 0.17
SNCA-205ENST00000394991 RIOK3O14730 519 aaKnown RBP16.13■□□□□ 0.17
SNCA-205ENST00000394991 FPGTO14772 594 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 MED7O43513 233 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 AP1G1O43747 822 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 ADCY5O95622 1261 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 ITGB6P18564 788 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 GNA15P30679 374 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 SLC5A2P31639 672 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 L1CAMP32004 1257 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 ABL2P42684 1182 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 SPIDRQ14159 915 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 TGIF1Q15583 401 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 COLEC12Q5KU26 742 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 ARTNQ5T4W7 220 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 FAM183BPQ6ZVS7 135 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 OR7D4Q8NG98 312 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 NAT6Q93015 286 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 LIN37Q96GY3 246 aaPredicted RBP16.13■□□□□ 0.17
SNCA-205ENST00000394991 LENG8Q96PV6 779 aaPredicted RBP16.13■□□□□ 0.17
SNCA-205ENST00000394991 LRRC61Q9BV99 259 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 INTS2Q9H0H0 1204 aaKnown RBP16.13■□□□□ 0.17
SNCA-205ENST00000394991 SYNDIG1Q9H7V2 258 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 PIGVQ9NUD9 493 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 WDR70Q9NW82 654 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 SPASTQ9UBP0 616 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 APOBEC3BQ9UH17 382 aaKnown RBP16.13■□□□□ 0.17
SNCA-205ENST00000394991 GGT7Q9UJ14 662 aa16.13■□□□□ 0.17
SNCA-205ENST00000394991 LRRK2Q5S007 2527 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms