RNA–Protein interactions for RNA: ENST00000394601.8

PTBP1-204, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene PTBP1, Length 3,185 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-204ENST00000394601 INSCQ1MX18 579 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 ANKRD20A4Q4UJ75 823 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 CASC4Q6P4E1 433 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 NET1Q7Z628 596 aaPredicted RBP15.78■□□□□ 0.12
PTBP1-204ENST00000394601 FAM156AQ8NDB6 213 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 PPP4R1Q8TF05 950 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 ATXN7L3BQ96GX2 97 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 COPG2Q9UBF2 871 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 GOLGA8QA0A0J9YX86 632 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 GOLGA8OA6NCC3 632 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 E9PBE3 544 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 GOLGA8NF8WBI6 632 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 G3V2L1 256 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 KLHL41O60662 606 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 HARS2P49590 506 aaKnown RBP15.78■□□□□ 0.12
PTBP1-204ENST00000394601 BEX3Q00994 111 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 TMEM259Q4ZIN3 620 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 HSP90AA5PQ58FG0 334 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 NAPRTQ6XQN6 538 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 TMC7Q7Z402 723 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 CMC1Q7Z7K0 106 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 GAB3Q8WWW8 586 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 MOCOSQ96EN8 888 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 NAT9Q9BTE0 207 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 OXCT2Q9BYC2 517 aaPredicted RBP15.78■□□□□ 0.12
PTBP1-204ENST00000394601 SEPT10Q9P0V9 454 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 DCDC2Q9UHG0 476 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 SOX13Q9UN79 622 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 SNX10Q9Y5X0 201 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 AP4B1Q9Y6B7 739 aa15.78■□□□□ 0.12
PTBP1-204ENST00000394601 NYNRINQ9P2P1 1898 aaKnown RBP15.78■□□□□ 0.12
PTBP1-204ENST00000394601 ZBTB24O43167 697 aaPredicted RBP15.77■□□□□ 0.12
PTBP1-204ENST00000394601 ATP5BP06576 529 aaKnown RBP15.77■□□□□ 0.12
PTBP1-204ENST00000394601 CCDC166P0CW27 439 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 SLC5A2P31639 672 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 AIF1P55008 147 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 TSPY1Q01534 308 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 ITGA7Q13683 1181 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 SPANXN3Q5MJ09 141 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 DPY19L2Q6NUT2 758 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 UPF1Q92900 1129 aaKnown RBP eCLIP15.77■□□□□ 0.122e-21■■■■■ 76.3
PTBP1-204ENST00000394601 RBBP8Q99708 897 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 SYT17Q9BSW7 474 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 SNX15Q9NRS6 342 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 DNAJC16Q9Y2G8 782 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 GLTPD2A6NH11 291 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 DCXO43602 365 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 VARSP26640 1264 aaKnown RBP15.77■□□□□ 0.12
PTBP1-204ENST00000394601 ALDH1A3P47895 512 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 MTTPP55157 894 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 ANO4Q32M45 955 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 FAM35AQ86V20 835 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 CCNYQ8ND76 341 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 GABPB2Q8TAK5 448 aaPredicted RBP15.77■□□□□ 0.12
PTBP1-204ENST00000394601 SENP8Q96LD8 212 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 CPNE1Q99829 537 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 PAAF1Q9BRP4 392 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 RHOBTB2Q9BYZ6 727 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 PNPOQ9NVS9 261 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 DDX43Q9NXZ2 648 aaKnown RBP15.77■□□□□ 0.12
PTBP1-204ENST00000394601 SCN10AQ9Y5Y9 1956 aa15.77■□□□□ 0.12
PTBP1-204ENST00000394601 A0A088AWK7 358 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 NDUFB5O43674 189 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 CACNG3O60359 315 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 COL6A2P12110 1019 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 TMED10P49755 219 aaKnown RBP15.77■□□□□ 0.11
PTBP1-204ENST00000394601 IDH3AP50213 366 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 CLCNKBP51801 687 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 GALNT2Q10471 571 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 LPIN1Q14693 890 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 SPRYD7Q5W111 196 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 FSTL4Q6MZW2 842 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 LPCAT2Q7L5N7 544 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 DCLK2Q8N568 766 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 DCUN1D1Q96GG9 259 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 ZNF512Q96ME7 567 aaPredicted RBP15.77■□□□□ 0.11
PTBP1-204ENST00000394601 CSNK1G1Q9HCP0 422 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 PTTG2Q9NZH5 202 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 STAP1Q9ULZ2 295 aa15.77■□□□□ 0.11
PTBP1-204ENST00000394601 SMIM31A0A1B0GVY4 71 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 BUD23O43709 281 aaKnown RBP15.76■□□□□ 0.11
PTBP1-204ENST00000394601 POLBP06746 335 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 USP17L7P0C7H9 530 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 MX2P20592 715 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 SERPINB5P36952 375 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 GP5P40197 560 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 CD300CQ08708 224 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 GRTP1Q5TC63 336 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 HDAC11Q96DB2 347 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 MFSD3Q96ES6 412 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 RAD54BQ9Y620 910 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 SERPINE1P05121 402 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 SBK3P0C264 359 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 CD1EP15812 388 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 PURAQ00577 322 aaKnown RBP15.76■□□□□ 0.11
PTBP1-204ENST00000394601 IRF9Q00978 393 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 TBL3Q12788 808 aaKnown RBP15.76■□□□□ 0.11
PTBP1-204ENST00000394601 CCDC92Q53HC0 331 aaPredicted RBP15.76■□□□□ 0.11
PTBP1-204ENST00000394601 CERCAMQ5T4B2 595 aa15.76■□□□□ 0.11
PTBP1-204ENST00000394601 PM20D1Q6GTS8 502 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms