RNA–Protein interactions for RNA: ENST00000392185.7

SNX9-201, Transcript of sorting nexin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX9, Length 4,198 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9-201ENST00000392185 SUGP1Q8IWZ8 645 aaKnown RBP16.72■□□□□ 0.27
SNX9-201ENST00000392185 FBXO39Q8N4B4 442 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 HJURPQ8NCD3 748 aaPredicted RBP16.72■□□□□ 0.27
SNX9-201ENST00000392185 SLC35B2Q8TB61 432 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 FZD10Q9ULW2 581 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 PIRO00625 290 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 GRIA1P42261 906 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 PACS1Q6VY07 963 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 LDB1Q86U70 411 aaPredicted RBP16.72■□□□□ 0.27
SNX9-201ENST00000392185 LRRC49Q8IUZ0 686 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 C7orf61Q8IZ16 206 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 SMG8Q8ND04 991 aaKnown RBP16.72■□□□□ 0.27
SNX9-201ENST00000392185 QKIQ96PU8 341 aaKnown RBP eCLIP16.72■□□□□ 0.275e-9■■■■■ 41.1
SNX9-201ENST00000392185 ACOX2Q99424 681 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 ACTR8Q9H981 624 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 ORC6Q9Y5N6 252 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 LAMA4Q16363 1823 aa16.72■□□□□ 0.27
SNX9-201ENST00000392185 C1orf232A0A0U1RR37 186 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 RNASEH1O60930 286 aaKnown RBP16.71■□□□□ 0.27
SNX9-201ENST00000392185 CRABP2P29373 138 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 FNDC3BQ53EP0 1204 aaKnown RBP16.71■□□□□ 0.27
SNX9-201ENST00000392185 RHBDF2Q6PJF5 856 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 WDTC1Q8N5D0 677 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 CATSPER2Q96P56 530 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 TMEM209Q96SK2 561 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 TRIM15Q9C019 465 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 TCF7L2Q9NQB0 619 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 ACSS2Q9NR19 701 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SLC13A4Q9UKG4 626 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SCN7AQ01118 1682 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SOCS7O14512 581 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 ATP5BP06576 529 aaKnown RBP16.71■□□□□ 0.27
SNX9-201ENST00000392185 RPS24P62847 133 aaKnown RBP16.71■□□□□ 0.27
SNX9-201ENST00000392185 HSPA14Q0VDF9 509 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 TRIM60Q495X7 471 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 OR52K2Q8NGK3 314 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 CASP10Q92851 521 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 PSMG2Q969U7 264 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 CENPKQ9BS16 269 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 IRAK2O43187 625 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SNX3O60493 162 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 CCNT2O60583 730 aaKnown RBP16.71■□□□□ 0.27
SNX9-201ENST00000392185 GJA1P17302 382 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SLC11A1P49279 550 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SMARCB1Q12824 385 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 TCEA2Q15560 299 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 DPYSL2Q16555 572 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 KIRREL3Q8IZU9 778 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 NIPA2Q8N8Q9 360 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 SPATA16Q9BXB7 569 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 PCDHGC4Q9Y5F7 938 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 CPQQ9Y646 472 aa16.71■□□□□ 0.27
SNX9-201ENST00000392185 XIRP1Q702N8 1843 aaKnown RBP16.71■□□□□ 0.27
SNX9-201ENST00000392185 CHRNA1P02708 482 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 RHOQP17081 205 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 ABCE1P61221 599 aaKnown RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 ACOX1Q15067 660 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 CYP1B1Q16678 543 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 CCDC153Q494R4 210 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 TRMT10BQ6PF06 316 aaKnown RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 C11orf96Q7Z7L8 435 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 ING5Q8WYH8 240 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 PGAP2Q9UHJ9 254 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 CYTH4Q9UIA0 394 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 ARHGAP26Q9UNA1 814 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 FAM237BA0A1B0GVD1 139 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 TCRBV7S3A2A0A539 114 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 DCXO43602 365 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 ACSL4O60488 711 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 KCNK10P57789 538 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 STARD3Q14849 445 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 PFKFB4Q16877 469 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 AGKQ53H12 422 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 RAB42Q8N4Z0 105 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 MID1IP1Q9NPA3 183 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 MRPL40Q9NQ50 206 aaKnown RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 PNMA8BQ9ULN7 279 aaPredicted RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 ABCA3Q99758 1704 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 SYCE1LA8MT33 242 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 SH3BGRLO75368 114 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 PTPN3P26045 913 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 MORN1Q5T089 497 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 KYAT3Q6YP21 454 aaKnown RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 TEX9Q8N6V9 391 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 RNF148Q8N7C7 305 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 FUBP3Q96I24 572 aaKnown RBP eCLIP16.7■□□□□ 0.26
SNX9-201ENST00000392185 CCDC138Q96M89 665 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 SLC9A7Q96T83 725 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 SCOCQ9UIL1 159 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 GNEQ9Y223 722 aaKnown RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 NEDD8-MDP1E9PL57 170 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 CLDN11O75508 207 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 BEST1O76090 585 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 CHRNA4P43681 627 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 SNRPD1P62314 119 aaKnown RBP16.7■□□□□ 0.26
SNX9-201ENST00000392185 FBXL19Q6PCT2 694 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 HMCESQ96FZ2 354 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 SLC39A8Q9C0K1 460 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 ABCG8Q9H221 673 aa16.7■□□□□ 0.26
SNX9-201ENST00000392185 THG1LQ9NWX6 298 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms