RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 PGAM4Q8N0Y7 254 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 SLC4A11Q8NBS3 891 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 OR9Q1Q8NGQ5 310 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 HTRA1Q92743 480 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 CASS4Q9NQ75 786 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 RIC8BQ9NVN3 520 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 AAR2Q9Y312 384 aaKnown RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 C9JVG2 144 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 PLA2G6O60733 806 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 NDUFS3O75489 264 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 RHOBTB1O94844 696 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 RUNX1T1Q06455 604 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 CXCL9Q07325 125 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 FAM98BQ52LJ0 330 aaKnown RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 LIPMQ5VYY2 423 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 CDHR3Q6ZTQ4 885 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 PSTKQ8IV42 348 aaKnown RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 AZIN2Q96A70 460 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 LIMD1Q9UGP4 676 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 FAM95CA0A1B0GW59 222 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 TMEM114B3SHH9 223 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 BNIP3LO60238 219 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 INSRRP14616 1297 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 ALOX15P16050 662 aaPredicted RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 C6orf183Q5T699 404 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 C8orf59Q8N0T1 100 aaPredicted RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 SNX19Q92543 992 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 P2RY11Q96G91 374 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 PKP2Q99959 881 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 POU4F1Q01851 419 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 DPYSQ14117 519 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 SV2CQ496J9 727 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 PPP1R26Q5T8A7 1209 aaPredicted RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 TTC30AQ86WT1 665 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 CRYGNQ8WXF5 182 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 PPP1R10Q96QC0 940 aaKnown RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 GATA5Q9BWX5 397 aaPredicted RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 UBQLN1Q9UMX0 589 aaKnown RBP14.43□□□□□ -0.1
RTF1-201ENST00000389629 ASB3Q9Y575 518 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 TEX264Q9Y6I9 313 aa14.43□□□□□ -0.1
RTF1-201ENST00000389629 SEC24AO95486 1093 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 METTL18O95568 372 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 HLA-DPA1P20036 260 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 GMPSP49915 693 aaPredicted RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 TKTL1P51854 596 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 EDEM1Q92611 657 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 BCLAF3A2AJT9 711 aaKnown RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 SPATA31C2B4DYI2 1134 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ZSCAN9O15535 394 aaPredicted RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 MAFO75444 373 aaPredicted RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 ZNF682O95780 498 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 MAP3K10Q02779 954 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 GNA12Q03113 381 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 CTBP1Q13363 440 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 TLR1Q15399 786 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 MYLK3Q32MK0 819 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 PAGE2BQ5JRK9 111 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 DEPDC1Q5TB30 811 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 IL23RQ5VWK5 629 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ZDHHC17Q8IUH5 632 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 DNERQ8NFT8 737 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 FBXO30Q8TB52 745 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ELP3Q9H9T3 547 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 TRIM39Q9HCM9 518 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 NFASCO94856 1347 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 TOR1BO14657 336 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 UGT1A6P19224 532 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 UGT1A1P22309 533 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 UGT1A4P22310 534 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 UGT1A3P35503 534 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 UGT1A5P35504 534 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 NPY2RP49146 381 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 PRKAA2P54646 552 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 DLG2Q15700 870 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 DPY19L2P1Q6NXN4 242 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 CENPLQ8N0S6 344 aaPredicted RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 BLOC1S5Q8TDH9 187 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 VPS45Q9NRW7 570 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ADAM28Q9UKQ2 775 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 RNF112Q9ULX5 631 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ANKRD6Q9Y2G4 727 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ASB14A6NK59 587 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 YDJCA8MPS7 323 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 RAD51BO15315 384 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 NADKO95544 446 aaPredicted RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 ZNF235Q14590 738 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 ZFP28Q8NHY6 868 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 PCDH19Q8TAB3 1148 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 OR52B2Q96RD2 323 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 OLA1Q9NTK5 396 aaKnown RBP14.42□□□□□ -0.1
RTF1-201ENST00000389629 PTPRJQ12913 1337 aa14.42□□□□□ -0.1
RTF1-201ENST00000389629 KLF11O14901 512 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TSC22D2O75157 780 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 CHRNGP07510 517 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 TPSB2P20231 275 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 GEMP55040 296 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 MRPL28Q13084 256 aaKnown RBP14.41□□□□□ -0.1
RTF1-201ENST00000389629 TPSAB1Q15661 275 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 POTEHQ6S545 545 aa14.41□□□□□ -0.1
RTF1-201ENST00000389629 ADGRF2Q8IZF7 708 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms