RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 LBRQ14739 615 aaKnown RBP14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 SETDB1Q15047 1291 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 CHI3L2Q15782 390 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 RABGAP1LQ5R372 815 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 N4BP2L1Q5TBK1 243 aaPredicted RBP14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 SNX30Q5VWJ9 437 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 IL31Q6EBC2 164 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 ESRP1Q6NXG1 681 aaKnown RBP14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 KYAT3Q6YP21 454 aaKnown RBP14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 TRIM42Q8IWZ5 723 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 FITM2Q8N6M3 262 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 GBP7Q8N8V2 638 aaPredicted RBP14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 TTC16Q8NEE8 873 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 PPP1R14CQ8TAE6 165 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 HAUS2Q9NVX0 235 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 TCAF1Q9Y4C2 921 aa14.98□□□□□ -0.01
RAB3IP-203ENST00000378809 A0A0D9SEW6 157 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 C2orf78A6NCI8 922 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 TRIM43BA6NCK2 446 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 TIMM44O43615 452 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SAT1P21673 171 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 RPS24P62847 133 aaKnown RBP14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 ATG16L1Q676U5 607 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 RANBP10Q6VN20 620 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 OTOP2Q7RTS6 562 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 FATE1Q969F0 183 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 E2F7Q96AV8 911 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 TRIM43Q96BQ3 446 aaPredicted RBP14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 PLD4Q96BZ4 506 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SPON2Q9BUD6 331 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 TRIM55Q9BYV6 548 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 CAB39LQ9H9S4 337 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 TRPC7Q9HCX4 862 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 MRPL17Q9NRX2 175 aaKnown RBP14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 WBP1LQ9NX94 342 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SMPD4Q9NXE4 827 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 HSFX1Q9UBD0 423 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 DCDC2Q9UHG0 476 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 MTO1Q9Y2Z2 717 aaKnown RBP14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 A0A0G2JND7 137 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 STC2O76061 302 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SPATA31D3P0C874 917 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 PAMP19021 973 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 GJA8P48165 433 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 KLHDC10Q6PID8 442 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 KDELC1Q6UW63 502 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SPATA31D4Q6ZUB0 917 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 CMTR2Q8IYT2 770 aaKnown RBP14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 CNPY4Q8N129 248 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 C10orf82Q8WW14 230 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 RNF38Q9H0F5 515 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 VPS45Q9NRW7 570 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 NSMCE4AQ9NXX6 385 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SLC2A6Q9UGQ3 507 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 SLC12A4Q9UP95 1085 aa14.97□□□□□ -0.01
RAB3IP-203ENST00000378809 GREB1Q4ZG55 1949 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 ZBBXA8MT70 800 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 TSPAN3O60637 253 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 BPGMP07738 259 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 GMPRP36959 345 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 EPHB3P54753 998 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 CSE1LP55060 971 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 THOC5Q13769 683 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 RAB33AQ14088 237 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 CNGA3Q16281 694 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 TMCO4Q5TGY1 634 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 RAPH1Q70E73 1250 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 DNAJB7Q7Z6W7 309 aaPredicted RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 DDX53Q86TM3 631 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 PGBD5Q8N414 524 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 TMEM199Q8N511 208 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 TEX26Q8N6G2 289 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 OR7D4Q8NG98 312 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 RFWD2Q8NHY2 731 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 PTCD2Q8WV60 388 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 ERP27Q96DN0 273 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 VPS39Q96JC1 886 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 MYRFLQ96LU7 910 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 LRRC37BQ96QE4 947 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 POLR1EQ9GZS1 481 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 RC3H2Q9HBD1 1191 aaKnown RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 UXTQ9UBK9 157 aaPredicted RBP14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 SLC39A10Q9ULF5 831 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 COL4A6Q14031 1691 aa14.96□□□□□ -0.01
RAB3IP-203ENST00000378809 SCAMP3O14828 347 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 PRAMEF11O60813 436 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 GJB3O75712 270 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 DCTN3O75935 186 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 KLKB1P03952 638 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 GSTA1P08263 222 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 SERPINH1P50454 418 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 CDH4P55283 916 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 GNA12Q03113 381 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 BST1Q10588 318 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 FASTKD1Q53R41 847 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 ZCCHC23Q6ZST2 131 aa14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 CCDC117Q8IWD4 279 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 TRMT2BQ96GJ1 504 aaKnown RBP14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 PRICKLE1Q96MT3 831 aaPredicted RBP14.95□□□□□ -0.02
RAB3IP-203ENST00000378809 SEMA3CQ99985 751 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms