RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 CSPG4P5Q96PW8 444 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 VAT1Q99536 393 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TRMOQ9BU70 441 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 ADI1Q9BV57 179 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 NFKBIZQ9BYH8 718 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 RHOJQ9H4E5 214 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 MEAF6Q9HAF1 191 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TRPC7Q9HCX4 862 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CASS4Q9NQ75 786 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 MAN1C1Q9NR34 630 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 RNF146Q9NTX7 359 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 C20orf96Q9NUD7 363 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CACNA2D2Q9NY47 1150 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 DTLQ9NZJ0 730 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 NCKIPSDQ9NZQ3 722 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TJP2Q9UDY2 1190 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CNOT6Q9ULM6 557 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TNFSF13BQ9Y275 285 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 FAM32AQ9Y421 112 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 PTPRFP10586 1907 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 ZSWIM8A7E2V4 1837 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 A0A087X1B8 175 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TRIM43BA6NCK2 446 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TARM1B6A8C7 271 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CFAP99D6REC4 459 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 MAGEB3O15480 346 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CNOT3O75175 753 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 RASAL1O95294 804 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 AP2A1O95782 977 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 NTRK1P04629 796 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 SNRPB2P08579 225 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 PDGFRBP09619 1106 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TNFSF9P41273 254 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 DPP6P42658 865 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 ACADSBP45954 432 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 RPL34P49207 117 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TMED10P49755 219 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 MNX1P50219 401 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 HLCSP50747 726 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 SLC5A3P53794 718 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 GALNT2Q10471 571 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 PEX6Q13608 980 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 PAFAH1B3Q15102 231 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 ATP6AP1Q15904 470 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 MAP7D1Q3KQU3 841 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 ARL13AQ5H913 290 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 PPM1JQ5JR12 505 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 NCBP2-AS2Q69YL0 99 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TRNP1Q6NT89 227 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 SLC26A9Q7LBE3 791 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 EFCAB3Q8N7B9 438 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 FAM47BQ8NA70 645 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 DNERQ8NFT8 737 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 S100ZQ8WXG8 99 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 SLCO4A1Q96BD0 722 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CENPNQ96H22 339 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 HEXIM2Q96MH2 286 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF641Q96N77 438 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 CORO1BQ9BR76 489 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 NT5C1AQ9BXI3 368 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 C1QTNF1Q9BXJ1 281 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 NGRNQ9NPE2 291 aaKnown RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TMEM45AQ9NWC5 275 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 SYBUQ9NX95 663 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TRHDEQ9UKU6 1024 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 MTF2Q9Y483 593 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 SNX13Q9Y5W8 968 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 PSAT1Q9Y617 370 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 GPC6Q9Y625 555 aaPredicted RBP8.32□□□□□ -1.08
PTPRR-203ENST00000378778 USP3Q9Y6I4 520 aa8.32□□□□□ -1.08
PTPRR-203ENST00000378778 TYW5A2RUC4 315 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 PALM2-AKAP2B1ALY0 433 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 SDHDO14521 159 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 AREL1O15033 823 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ZBTB11O95625 1053 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 PTPN1P18031 435 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 CCNA2P20248 432 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 FASP25445 335 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 GNL1P36915 607 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 MAGEA10P43363 369 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 BAATQ14032 418 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ZNF846Q147U1 533 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 FAM187BQ17R55 369 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 C15orf59Q2T9L4 293 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 PKDCCQ504Y2 493 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 GLRA4Q5JXX5 417 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 PPM1LQ5SGD2 360 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 CCNYL2Q5T2Q4 361 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 ITPRIPL1Q6GPH6 555 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 LCN8Q6JVE9 175 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 FAM117BQ6P1L5 589 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 SCYL2Q6P3W7 929 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 SNX31Q8N9S9 440 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 KDM1BQ8NB78 822 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 RDH12Q96NR8 316 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 NEURL2Q9BR09 285 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 WDR12Q9GZL7 423 aaKnown RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 FZD8Q9H461 694 aa8.31□□□□□ -1.08
PTPRR-203ENST00000378778 WDR55Q9H6Y2 383 aaPredicted RBP8.31□□□□□ -1.08
PTPRR-203ENST00000378778 TRPV5Q9NQA5 729 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms