RNA–Protein interactions for RNA: ENST00000376656.8

TRIM39-201, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 2 BASIC

Gene TRIM39, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-201ENST00000376656 VPS45Q9NRW7 570 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 CACNA2D2Q9NY47 1150 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 EVPLQ92817 2033 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 TCRBV3S1A0A5B6 114 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 HEATR9A2RTY3 570 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ZNF839A8K0R7 811 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 FAM155AB1AL88 458 aaPredicted RBP16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ZNF460Q14592 562 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 Q3C1V9 767 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 LAYNQ6UX15 382 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 SLC26A9Q7LBE3 791 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 PSTKQ8IV42 348 aaKnown RBP16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ZNF786Q8N393 782 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 MYOZ2Q9NPC6 264 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 XPR1Q9UBH6 696 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 TANC1Q9C0D5 1861 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 SYNJ2BP-COX16A0A087WUM0 186 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 TARM1B6A8C7 271 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ATE1O95260 518 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 CSRP3P50461 194 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 CSE1LP55060 971 aaKnown RBP16.73■□□□□ 0.27
TRIM39-201ENST00000376656 RBP5P82980 135 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 USP10Q14694 798 aaKnown RBP16.73■□□□□ 0.27
TRIM39-201ENST00000376656 HSDL1Q3SXM5 330 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ZBED5Q49AG3 693 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 C6orf10Q5SRN2 563 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 REP15Q6BDI9 236 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 CENPLQ8N0S6 344 aaPredicted RBP16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ZNF280CQ8ND82 737 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 DNERQ8NFT8 737 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 RNF139Q8WU17 664 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 AFG1LQ8WV93 481 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 TFAP2CQ92754 450 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 TSNARE1Q96NA8 513 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 UHRF1Q96T88 793 aaPredicted RBP16.73■□□□□ 0.27
TRIM39-201ENST00000376656 ASB7Q9H672 318 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 COX16Q9P0S2 106 aa16.73■□□□□ 0.27
TRIM39-201ENST00000376656 AP2A1O95782 977 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 SLC35E2BP0CK96 405 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 MCF2P10911 925 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 GABRB3P28472 473 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 ESRRGP62508 458 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PITX1P78337 314 aaPredicted RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PRKCQQ04759 706 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 TSTD2Q5T7W7 516 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 EFCAB12Q6NXP0 572 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 FASTKD5Q7L8L6 764 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PELI3Q8N2H9 469 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 NDRG1Q92597 394 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 MAELQ96JY0 434 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 GPR22Q99680 433 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 DPEP3Q9H4B8 488 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 INIPQ9NRY2 104 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 SFMBT1Q9UHJ3 866 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 SCN1AP35498 2009 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 KANSL1LA0AUZ9 987 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 SAC3D1A6NKF1 404 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 GAS2O43903 313 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PTPRAP18433 802 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 NMBRP28336 390 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PFKPQ01813 784 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 LRRC8EQ6NSJ5 796 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 ZDHHC17Q8IUH5 632 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 SLC41A1Q8IVJ1 513 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 TOP1MTQ969P6 601 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PAIP1Q9H074 479 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 CCDC167Q9P0B6 97 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 A0A087WXM4 84 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 TTC36A6NLP5 189 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PPEF2O14830 753 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 FUT4P22083 530 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PITRM1Q5JRX3 1037 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 FAM219BQ5XKK7 198 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PPP4R4Q6NUP7 873 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 ZC3HC1Q86WB0 502 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 STON2Q8WXE9 905 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 CASS4Q9NQ75 786 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 GTSE1Q9NYZ3 720 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PAIP2BQ9ULR5 123 aaKnown RBP16.72■□□□□ 0.27
TRIM39-201ENST00000376656 ANKRD6Q9Y2G4 727 aa16.72■□□□□ 0.27
TRIM39-201ENST00000376656 PTPN3P26045 913 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 ADORA2BP29275 332 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 PRKAA2P54646 552 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 AGKQ53H12 422 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 CNSTQ6PJW8 725 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 METTL7BQ6UX53 244 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 LYSMD3Q7Z3D4 306 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 SPNS2Q8IVW8 549 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 AGBL3Q8NEM8 1001 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 SGF29Q96ES7 293 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 CXCL16Q9H2A7 254 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 PFDN4Q9NQP4 134 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 SLC38A7Q9NVC3 462 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 SMOXQ9NWM0 555 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 CD300AQ9UGN4 299 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 DOLKQ9UPQ8 538 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 AKAP10O43572 662 aa16.71■□□□□ 0.27
TRIM39-201ENST00000376656 SEC24DO94855 1032 aaPredicted RBP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 HNRNPLP14866 589 aaKnown RBP eCLIP16.71■□□□□ 0.27
TRIM39-201ENST00000376656 PORP16435 677 aaPredicted RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms