RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 SOWAHAQ2M3V2 549 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 SLC10A6Q3KNW5 377 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 ACBD5Q5T8D3 534 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TRIM67Q6ZTA4 783 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 LPCAT2Q7L5N7 544 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TMEM110Q86TL2 294 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF567Q8N184 647 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 PCDH20Q8N6Y1 951 aaKnown RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MFSD3Q96ES6 412 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 HSPBAP1Q96EW2 488 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TSNARE1Q96NA8 513 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MRPL45Q9BRJ2 306 aaKnown RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TRPV6Q9H1D0 765 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 SUDS3Q9H7L9 328 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 LRRC40Q9H9A6 602 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 SPC25Q9HBM1 224 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 OXSMQ9NWU1 459 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 ZDHHC2Q9UIJ5 367 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 ADAM28Q9UKQ2 775 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 HACD1B0YJ81 288 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 PHGDHO43175 533 aaKnown RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MPOP05164 745 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 RBP5P82980 135 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 CACNB2Q08289 660 aaPredicted RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MPP3Q13368 585 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 ITGA7Q13683 1181 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 LPIN1Q14693 890 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 APOL2Q9BQE5 337 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 PRDM12Q9H4Q4 367 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 COQ10BQ9H8M1 238 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 EIF2B3Q9NR50 452 aaKnown RBP11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TMPRSS4Q9NRS4 437 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 BFARQ9NZS9 450 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 TLK1Q9UKI8 766 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 FIS1Q9Y3D6 152 aa11.26□□□□□ -0.61
CCDC40-203ENST00000374877 MBLAC1A4D2B0 266 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF487B1APH4 448 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ZSCAN9O15535 394 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 SMIM10L2AP0DMW4 78 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 SMIM10L2BP0DMW5 78 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 IMPDH2P12268 514 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ADORA2BP29275 332 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 AVPR1AP37288 418 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 EMP3P54852 163 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ADRM1Q16186 407 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 AMHR2Q16671 573 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 EML3Q32P44 896 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MGAT5BQ3V5L5 792 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MARCH8Q5T0T0 291 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 TP53INP2Q8IXH6 220 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MYO1HQ8N1T3 1032 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 CCNYL1Q8N7R7 359 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 TMEM102Q8N9M5 508 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 GRIN3AQ8TCU5 1115 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 SLC35F5Q8WV83 523 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 FAM149B1Q96BN6 582 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 UNKQ9C0B0 810 aaKnown RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 PCDHAC1Q9H158 963 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 VRTNQ9H8Y1 702 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 VANGL2Q9ULK5 521 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 C7orf72A4D263 438 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 GRID2O43424 1007 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 H2AFYO75367 372 aaKnown RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MYL3P08590 195 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MAGEA12P43365 314 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 PTPN9P43378 593 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 BORAQ6PGQ7 559 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 OR6B3Q8NGW1 331 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 KIF12Q96FN5 646 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 VPS39Q96JC1 886 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 TMEM79Q9BSE2 394 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 DRC3Q9H069 523 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ZBTB26Q9HCK0 441 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 IARS2Q9NSE4 1012 aaKnown RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 RNF11Q9Y3C5 154 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 SNX13Q9Y5W8 968 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ANK1P16157 1881 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 HCRTO43612 131 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ZNF26P17031 533 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 CST5P28325 142 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 HOXC8P31273 242 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 PURAQ00577 322 aaKnown RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 PRKAA1Q13131 559 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 FAM187BQ17R55 369 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 LIPMQ5VYY2 423 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 GK5Q6ZS86 529 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 NUP93Q8N1F7 819 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 LRTOMTQ8WZ04 291 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MTG1Q9BT17 334 aaPredicted RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ASB7Q9H672 318 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 ANLNQ9NQW6 1124 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 MID2Q9UJV3 735 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 VPS28Q9UK41 221 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 AP4S1Q9Y587 144 aa11.25□□□□□ -0.61
CCDC40-203ENST00000374877 COPG1Q9Y678 874 aaKnown RBP11.25□□□□□ -0.61
CCDC40-203ENST00000374877 TMEM233B4DJY2 109 aa11.24□□□□□ -0.61
CCDC40-203ENST00000374877 ACOT8O14734 319 aa11.24□□□□□ -0.61
CCDC40-203ENST00000374877 SNX16P57768 344 aa11.24□□□□□ -0.61
CCDC40-203ENST00000374877 USP41Q3LFD5 358 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms