RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 MLPHQ9BV36 600 aaPredicted RBP6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ADI1Q9BV57 179 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 NLNQ9BYT8 704 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 PRKD2Q9BZL6 878 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ALKBH4Q9NXW9 302 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 COMMD9Q9P000 198 aa6.38□□□□□ -1.39
PTPN3-202ENST00000374541 ZMYM2Q9UBW7 1377 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 GSAPA4D1B5 854 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 MGRN1O60291 552 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CBFA2T3O75081 653 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 FBXO21O94952 628 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CRTAMO95727 393 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TFE3P19532 575 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 SKIV2L2P42285 1042 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 MAPKAPK2P49137 400 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 GJA9P57773 515 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 VAC14Q08AM6 782 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CAMK2GQ13555 558 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 NDUFAF6Q330K2 333 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TCEAL5Q5H9L2 206 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 DGKKQ5KSL6 1271 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 SAMD4BQ5PRF9 694 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TYW3Q6IPR3 259 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 RETSATQ6NUM9 610 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 NYAP1Q6ZVC0 841 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 AHI1Q8N157 1196 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 C12orf76Q8N812 135 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 PURBQ96QR8 312 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TMEM120AQ9BXJ8 343 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 EPB41L4BQ9H329 900 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 NOL6Q9H6R4 1146 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 NRDE2Q9H7Z3 1164 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CD248Q9HCU0 757 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 INTS13Q9NVM9 706 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 SAE1Q9UBE0 346 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TMCO1Q9UM00 188 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 PSMD12O00232 456 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 SERPINE1P05121 402 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ATP12AP54707 1039 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ADARP55265 1226 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 RHOAP61586 193 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 FOXM1Q08050 763 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 MSLNQ13421 630 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 KLHDC7AQ5VTJ3 777 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 FBXO42Q6P3S6 717 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 B3GNT6Q6ZMB0 384 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 AMER2Q8N7J2 671 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 OXER1Q8TDS5 423 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 KCNB2Q92953 911 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 NMD3Q96D46 503 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ATP6V1HQ9UI12 483 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 VPS51Q9UID3 782 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CROTQ9UKG9 612 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ING4Q9UNL4 249 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 COMMD3-BMI1R4GMX3 469 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 N4BP2Q86UW6 1770 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 BCLAF3A2AJT9 711 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC162PA2VCL2 907 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 EFCAB10A6NFE3 127 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CBX4O00257 560 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 IFRD1O00458 451 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CES2O00748 559 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TPST1O60507 370 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF24P17028 368 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 GTF2E2P29084 291 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CPA2P48052 419 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 AQP5P55064 265 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 FCHO2Q0JRZ9 810 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TRAF2Q12933 501 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 MROH9Q5TGP6 573 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 MACC1Q6ZN28 852 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 MPP4Q96JB8 637 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 BTBD10Q9BSF8 475 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 CCDC28BQ9BUN5 200 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 SLC25A23Q9BV35 468 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ZDHHC4Q9NPG8 344 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ETAA1Q9NY74 926 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ADAM28Q9UKQ2 775 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 C15orf41Q9Y2V0 281 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 COL16A1Q07092 1604 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 OR6C75A6NL08 312 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 PIK3CDO00329 1044 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF185O15231 689 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 GFRA3O60609 400 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 LSM8O95777 96 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TSPAN19P0C672 248 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 GZMAP12544 262 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 KELP23276 732 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 TPP2P29144 1249 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 RAB2AP61019 212 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 INO80DQ53TQ3 878 aaPredicted RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 DCAF6Q58WW2 860 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 SLC25A24Q6NUK1 477 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ZNF605Q86T29 641 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 ALYREFQ86V81 257 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 EXOC3L1Q86VI1 746 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 OR2W6PQ8NHA6 318 aa6.37□□□□□ -1.39
PTPN3-202ENST00000374541 DNAJC1Q96KC8 554 aaKnown RBP6.37□□□□□ -1.39
PTPN3-202ENST00000374541 C6orf62Q9GZU0 229 aaPredicted RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms