RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 HLA-DQB2P05538 268 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 ATP5BP06576 529 aaKnown RBP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 IVDP26440 423 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 CD68P34810 354 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 CTSOP43234 321 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 CARSP49589 748 aaKnown RBP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 GABPB1Q06547 395 aaPredicted RBP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 HLTFQ14527 1009 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 ZNF235Q14590 738 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 CYTH1Q15438 398 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 FAM182AQ5T1J6 154 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 ALG1LQ6GMV1 187 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 ITPRIPL1Q6GPH6 555 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 PID1Q7Z2X4 250 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 BBS5Q8N3I7 341 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 GOLGA6L1Q8N7Z2 621 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 LRRC45Q96CN5 670 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 MSANTD3Q96H12 275 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 AGAP3Q96P47 875 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 PSKH2Q96QS6 385 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 P2RY13Q9BPV8 354 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 GBA3Q9H227 469 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 HEBP1Q9NRV9 189 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 HAUS2Q9NVX0 235 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 ELOVL2Q9NXB9 296 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 SLC25A13Q9UJS0 675 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 NFU1Q9UMS0 254 aa14.88□□□□□ -0.03
SMPDL3B-201ENST00000373888 TBC1D3BA6NDS4 549 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 NEBLO76041 1014 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 TMCC1O94876 653 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 APODP05090 189 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 SRPRAP08240 638 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 DLDP09622 509 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 BMP1P13497 986 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 HSPA9P38646 679 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 ADCY8P40145 1251 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 VPS41P49754 854 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 GALK1P51570 392 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 GPS1Q13098 491 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 TXNDC11Q6PKC3 985 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 NUDT18Q6ZVK8 323 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 GSPT2Q8IYD1 628 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 CNPY4Q8N129 248 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 PGBD5Q8N414 524 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 SH2D3CQ8N5H7 860 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 EXOC4Q96A65 974 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 MRGPRX3Q96LB0 322 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 MGME1Q9BQP7 344 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 CINPQ9BW66 212 aaPredicted RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 CIPCQ9C0C6 399 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 GLOD4Q9HC38 313 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 NT5MQ9NPB1 228 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 SORCS3Q9UPU3 1222 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 ERVW-1Q9UQF0 538 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 COL6A3P12111 3177 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 MIA3Q5JRA6 1907 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 K7ERQ8 282 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 SMAD6O43541 496 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 METTL18O95568 372 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 SRCP12931 536 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 NFKB1P19838 968 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 FDFT1P37268 417 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 STK19P49842 368 aaPredicted RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 PTPRNQ16849 979 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 PARP6Q2NL67 630 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 ATP11CQ8NB49 1132 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 KDM1BQ8NB78 822 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 TSEN2Q8NCE0 465 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 ISG20Q96AZ6 181 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 MYO19Q96H55 970 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 RPL10LQ96L21 214 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 ASB2Q96Q27 587 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 FCRL5Q96RD9 977 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 TRIM31Q9BZY9 425 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 CEP44Q9C0F1 390 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 POLR1EQ9GZS1 481 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 FBRSL1Q9HCM7 1045 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 LHX3Q9UBR4 397 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 RSPH14Q9UHP6 348 aa14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 FCF1Q9Y324 198 aaKnown RBP14.87□□□□□ -0.03
SMPDL3B-201ENST00000373888 GOLGA6BA6NDN3 693 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 DNALI1O14645 258 aaPredicted RBP14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 MUSKO15146 869 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 ATP9BO43861 1147 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 OPA1O60313 960 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 PSMB4P28070 264 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 OAS2P29728 719 aaKnown RBP14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 RPL21P46778 160 aaKnown RBP14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 NSUN2Q08J23 767 aaKnown RBP eCLIP14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 SEMA5AQ13591 1074 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 SPDYCQ5MJ68 293 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 IER5LQ5T953 404 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 SFTPA1Q8IWL2 248 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 KLHDC8BQ8IXV7 354 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 CYB5D2Q8WUJ1 264 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 UCMAQ8WVF2 138 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 SORCS1Q8WY21 1168 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 SNF8Q96H20 258 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 PPP1R2P1Q96PQ5 205 aa14.86□□□□□ -0.03
SMPDL3B-201ENST00000373888 RUFY1Q96T51 708 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms