RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 TRIM17Q9Y577 477 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CTDP1Q9Y5B0 961 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 MAGED1Q9Y5V3 778 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SNX9Q9Y5X1 595 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GMEB1Q9Y692 573 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PTPRFP10586 1907 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 AHDC1Q5TGY3 1603 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 C1orf232A0A0U1RR37 186 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SH3PXD2BA1X283 911 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 H3BMQ9 156 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 H3BNH8 94 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 DLGAP1O14490 977 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PPEF2O14830 753 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GIPC1O14908 333 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 AURKAO14965 403 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 BIRC5O15392 142 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 HTRA2O43464 458 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 FAM189A1O60320 539 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GLRA3O75311 464 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TPPPO94811 219 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 LYPLA2O95372 231 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 H6PDO95479 791 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 C2P06681 752 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 HOXC6P09630 235 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 OCM2P0CE71 109 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 OCMP0CE72 109 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ZNF23P17027 643 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TFEBP19484 476 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 MAGP20916 626 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GPD1P21695 349 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 MATN1P21941 496 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ME2P23368 584 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TBXAS1P24557 533 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ALDH4A1P30038 563 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 OXTRP30559 389 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 HOXA10P31260 410 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GPD2P43304 727 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CD97P48960 835 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CDK9P50750 372 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 BMXP51813 675 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 OXCT1P55809 520 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 YWHAEP62258 255 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GLRA4Q5JXX5 417 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SH2D4BQ5SQS7 431 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 EGFLAMQ63HQ2 1017 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 GRAMD4Q6IC98 578 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 LRRC8EQ6NSJ5 796 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 DLK2Q6UY11 383 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CHSY3Q70JA7 882 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ARCQ7LC44 396 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 IFNEQ86WN2 208 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ERI1Q8IV48 349 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 LSMEM2Q8N112 164 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CBR4Q8N4T8 237 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 C7orf31Q8N865 590 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 RNF149Q8NC42 400 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 BPIFB6Q8NFQ5 453 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SH3RF2Q8TEC5 729 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CERS2Q96G23 380 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 RMND5BQ96G75 393 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 COG8Q96MW5 612 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 OSBPL11Q9BXB4 747 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 OSBPL6Q9BZF3 934 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SIAEQ9HAT2 523 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 TRPC7Q9HCX4 862 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 JPH1Q9HDC5 661 aaPredicted RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CHRAC1Q9NRG0 131 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 ANKEF1Q9NU02 776 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 EXD2Q9NVH0 621 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 DTLQ9NZJ0 730 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 CNOT6Q9ULM6 557 aaKnown RBP5.5□□□□□ -1.53
ATG4A-204ENST00000372246 RAB26Q9ULW5 256 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 AP4S1Q9Y587 144 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 SNX10Q9Y5X0 201 aa5.5□□□□□ -1.53
ATG4A-204ENST00000372246 RGSL1A5PLK6 1076 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 C2CD4BA6NLJ0 364 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PPP6CO00743 305 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 NDUFB5O43674 189 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MFSD11O43934 449 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PFKMP08237 780 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MTHFD1P11586 935 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 NCK1P16333 377 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MX2P20592 715 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ATP6V1B2P21281 511 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 KCNA5P22460 613 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 ELK4P28324 431 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CTHP32929 405 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 MAGEA3P43357 314 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 HARS2P49590 506 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 EIF2B2P49770 351 aaKnown RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 SMCPP49901 116 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 NDST1P52848 882 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 PTPN11Q06124 597 aaPredicted RBP5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CTBP1Q13363 440 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 DNASE1L3Q13609 305 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 TBCCQ15814 346 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 CLEC6AQ6EIG7 209 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 GALNT18Q6P9A2 607 aa5.49□□□□□ -1.53
ATG4A-204ENST00000372246 DCDC5Q6ZRR9 648 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms