RNA–Protein interactions for RNA: ENST00000368908.9

LYSMD1-201, Transcript of LysM domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD1, Length 2,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD1-201ENST00000368908 SOCS2O14508 198 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 NOL3O60936 208 aaKnown RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 STAMBPO95630 424 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 C2P06681 752 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 TCN1P20061 433 aaPredicted RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SDC4P31431 198 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 GMPRP36959 345 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 GRIA4P48058 902 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 TMED10P49755 219 aaKnown RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 RAB39AQ14964 217 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 DCAF6Q58WW2 860 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 TMEM198Q66K66 360 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 NXNQ6DKJ4 435 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 FAM45BPQ6NSW5 357 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 DLK2Q6UY11 383 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 STRA8Q7Z7C7 330 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ANKRD52Q8NB46 1076 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 COLGALT1Q8NBJ5 622 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 FAM156AQ8NDB6 213 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 FAM45AQ8TCE6 357 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 AGR3Q8TD06 166 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 TWNKQ96RR1 684 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 MCMBPQ9BTE3 642 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 C1orf50Q9BV19 199 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ADI1Q9BV57 179 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 GLIS2Q9BZE0 524 aaPredicted RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 LRRC40Q9H9A6 602 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 RMI1Q9H9A7 625 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 NGRNQ9NPE2 291 aaKnown RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SPAG4Q9NPE6 437 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SMOXQ9NWM0 555 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ZDHHC2Q9UIJ5 367 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 A0A1W2PPW3 197 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 DLGAP1O14490 977 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SDHDO14521 159 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 MSCO60682 206 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ASNSP08243 561 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 HSPA8P11142 646 aaKnown RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 IRF9Q00978 393 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SQLEQ14534 574 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SLC36A3Q495N2 470 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 GLRA4Q5JXX5 417 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 C6orf10Q5SRN2 563 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 C8orf82Q6P1X6 216 aaPredicted RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ZBTB33Q86T24 672 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 CXorf38Q8TB03 319 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ADAM32Q8TC27 787 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SEPT8Q92599 483 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ZUFSPQ96AP4 578 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 NOL11Q9H8H0 719 aaKnown RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 MRM3Q9HC36 420 aaKnown RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 ATAD3AQ9NVI7 634 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 CACNA2D2Q9NY47 1150 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 DTLQ9NZJ0 730 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SCHIP1Q9P0W5 487 aaPredicted RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 SPATA7Q9P0W8 599 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 KIAA1257Q9ULG3 409 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 DOLKQ9UPQ8 538 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 TRIM17Q9Y577 477 aa10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 GPC6Q9Y625 555 aaPredicted RBP10.66□□□□□ -0.7
LYSMD1-201ENST00000368908 KCNU1A8MYU2 1149 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 CFAP99D6REC4 459 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 XPOTO43592 962 aaKnown RBP10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 NPHS1O60500 1241 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 CNOT3O75175 753 aaKnown RBP10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 IL18RAPO95256 599 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 CPNE6O95741 557 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 EIF2S1P05198 315 aaKnown RBP10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 BMXP51813 675 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TMBIM6P55061 237 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 MERTKQ12866 999 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 PMS2P3Q13401 168 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TREML2Q5T2D2 321 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 NCBP2-AS2Q69YL0 99 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 REP15Q6BDI9 236 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 LCLAT1Q6UWP7 414 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 GK5Q6ZS86 529 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 LSMEM2Q8N112 164 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 SIX6OS1Q8N1H7 587 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TMEM151AQ8N4L1 468 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 OR2T34Q8NGX1 318 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 OR2T3Q8NH03 318 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 STYXQ8WUJ0 223 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 C17orf50Q8WW18 174 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TANKQ92844 425 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 PIWIL1Q96J94 861 aaKnown RBP10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TSNARE1Q96NA8 513 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 C1QTNF1Q9BXJ1 281 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 PCDHAC1Q9H158 963 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 LRRC4Q9HBW1 653 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 RIC8BQ9NVN3 520 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TRNAU1APQ9NX07 287 aaKnown RBP10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TMEM181Q9P2C4 612 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 HESX1Q9UBX0 185 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 CNTNAP1P78357 1384 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 PAPPA2Q9BXP8 1791 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 TCP10L2B9ZVM9 353 aa10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 KPNA4O00629 521 aaPredicted RBP10.65□□□□□ -0.7
LYSMD1-201ENST00000368908 RGS20O76081 388 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms