RNA–Protein interactions for RNA: ENST00000368295.8

ECHDC1-205, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,966 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-205ENST00000368295 PDZD8Q8NEN9 1154 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 VN1R2Q8NFZ6 395 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 LINS1Q8NG48 757 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 CCDC110Q8TBZ0 833 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM151AQ8WW52 585 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 PTCHD1Q96NR3 888 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 CATSPER2Q96P56 530 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 RAD9AQ99638 391 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 CGRRF1Q99675 332 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 HEPHQ9BQS7 1158 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 MCMBPQ9BTE3 642 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 LGR4Q9BXB1 951 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 EIF2AQ9BY44 585 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 GPR63Q9BZJ6 419 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 B3GNT4Q9C0J1 378 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 NSRP1Q9H0G5 558 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 INTS2Q9H0H0 1204 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 HSD3B7Q9H2F3 369 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC35C2Q9NQQ7 365 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 IARS2Q9NSE4 1012 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 SEMA4GQ9NTN9 838 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 DECR2Q9NUI1 292 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 ERVK13-1Q9NX77 482 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 HMG20BQ9P0W2 317 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 FETUBQ9UGM5 382 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 FEM1BQ9UK73 627 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 GMEB2Q9UKD1 530 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 ADAMTS6Q9UKP5 1117 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 PSME2Q9UL46 239 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 CTNND2Q9UQB3 1225 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 NOC2LQ9Y3T9 749 aaKnown RBP3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 GPR45Q9Y5Y3 372 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 CYP46A1Q9Y6A2 500 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 ELP1O95163 1332 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 SDK1Q7Z5N4 2213 aa3.64□□□□□ -1.83
ECHDC1-205ENST00000368295 NDUFS8O00217 210 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PSMD9O00233 223 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 VILLO15195 856 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TBX1O43435 398 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PROM1O43490 865 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SMAD6O43541 496 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NARSO43776 548 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HPXP02790 462 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SCG5P05408 212 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 RB1P06400 928 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PGK2P07205 417 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 UBTFL6P0CB48 400 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 KRT4P19013 534 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 IDUAP35475 653 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 EIF2DP41214 584 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 AFMP43652 599 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NR2C2P49116 596 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DIO1P49895 249 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 DNM2P50570 870 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NOVA1P51513 510 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HK2P52789 917 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PPP5CP53041 499 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HADHBP55084 474 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 GFRA1P56159 465 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 YWHAZP63104 245 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TUBA1BP68363 451 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 IRX1P78414 480 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CSTF1Q05048 431 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ITIH3Q06033 890 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SLC12A1Q13621 1099 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NFE2L1Q14494 772 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 RBBP5Q15291 538 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SF3A2Q15428 464 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 UAP1L1Q3KQV9 507 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SHEQ5VZ18 495 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HLA-DQA1Q5Y7H0 255 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NFRKBQ6P4R8 1299 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ZPBP2Q6X784 338 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TUBA1AQ71U36 451 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 RABEPKQ7Z6M1 372 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TTC7BQ86TV6 843 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 RSPH3Q86UC2 560 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SCN4BQ8IWT1 228 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 LILRA2Q8N149 483 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 TTC39CQ8N584 583 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 NIPA2Q8N8Q9 360 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 MRPL43Q8N983 215 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 IGSF22Q8N9C0 903 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 FEZF2Q8TBJ5 459 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 FAM71BQ8TC56 605 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 THAP4Q8WY91 577 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SEPT1Q8WYJ6 367 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SUSD6Q92537 303 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CUL5Q93034 780 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 EID2BQ96D98 161 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 C11orf24Q96F05 449 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 PDLIM5Q96HC4 596 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ART5Q96L15 291 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 HS6ST2Q96MM7 605 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 CTAGE1Q96RT6 745 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 SH3GL2Q99962 352 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 RTP3Q9BQQ7 232 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 RIOK1Q9BRS2 568 aaKnown RBP3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 G6PC3Q9BUM1 346 aa3.63□□□□□ -1.83
ECHDC1-205ENST00000368295 ITPAQ9BY32 194 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms