RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 UGT1A6P19224 532 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 UGT1A1P22309 533 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 UGT1A4P22310 534 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 UGT1A3P35503 534 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 UGT1A5P35504 534 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 IKBKEQ14164 716 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 NEDD8Q15843 81 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 PCDHB12Q9Y5F1 795 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 RGPD3A6NKT7 1758 aaPredicted RBP19.91■□□□□ 0.78
TRIM58-201ENST00000366481 RGPD4Q7Z3J3 1758 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 C1orf232A0A0U1RR37 186 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 H3BNH8 94 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 H3BRB1 525 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 MATN2O00339 956 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 PRDX6P30041 224 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 TRAF2Q12933 501 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 PLEKHA8Q96JA3 519 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 SNX15Q9NRS6 342 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 SNX10Q9Y5X0 201 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 TRIM13O60858 407 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 TIPRLO75663 272 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 PIGNO95427 931 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 CDH3P22223 829 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 EEF1B2P24534 225 aaKnown RBP19.91■□□□□ 0.78
TRIM58-201ENST00000366481 NUMBP49757 651 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 SULT1E1P49888 294 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 ADIGQ0VDE8 80 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 NOL9Q5SY16 702 aaKnown RBP19.91■□□□□ 0.78
TRIM58-201ENST00000366481 PGAM4Q8N0Y7 254 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 ACMSDQ8TDX5 336 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 BORCS5Q969J3 196 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 AGAP2Q99490 1192 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 CORO1BQ9BR76 489 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 EFHD1Q9BUP0 239 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 CXorf21Q9HAI6 301 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 SQORQ9Y6N5 450 aa19.91■□□□□ 0.78
TRIM58-201ENST00000366481 ZNF195O14628 629 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 BEST1O76090 585 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 SOX11P35716 441 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 TGFBIQ15582 683 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 PID1Q7Z2X4 250 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 HERC6Q8IVU3 1022 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 CHERPQ8IWX8 916 aaKnown RBP19.9■□□□□ 0.78
TRIM58-201ENST00000366481 CENPSQ8N2Z9 138 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 OR52K1Q8NGK4 314 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 P2RY11Q96G91 374 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 BIRC8Q96P09 236 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 ZNF670Q9BS34 389 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 IGSF9Q9P2J2 1179 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 CDYLQ9Y232 598 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 A0A087WXM4 84 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 LTFP02788 710 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 TKTP29401 623 aaKnown RBP19.9■□□□□ 0.78
TRIM58-201ENST00000366481 NAGLUP54802 743 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 GSTM4Q03013 218 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 EGFLAMQ63HQ2 1017 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 TMEM110Q86TL2 294 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 DCLK2Q8N568 766 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 SNX31Q8N9S9 440 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 APBA2Q99767 749 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 TASP1Q9H6P5 420 aa19.9■□□□□ 0.78
TRIM58-201ENST00000366481 A0A096LPK6 155 aa19.89■□□□□ 0.78
TRIM58-201ENST00000366481 BCAS2O75934 225 aaPredicted RBP19.89■□□□□ 0.78
TRIM58-201ENST00000366481 ZNF26P17031 533 aaPredicted RBP19.89■□□□□ 0.78
TRIM58-201ENST00000366481 MAP4P27816 1152 aaKnown RBP19.89■□□□□ 0.78
TRIM58-201ENST00000366481 HARS2P49590 506 aaKnown RBP19.89■□□□□ 0.78
TRIM58-201ENST00000366481 NR1D2Q14995 579 aa19.89■□□□□ 0.78
TRIM58-201ENST00000366481 HFE2Q6ZVN8 426 aa19.89■□□□□ 0.78
TRIM58-201ENST00000366481 MPHOSPH6Q99547 160 aaKnown RBP19.89■□□□□ 0.78
TRIM58-201ENST00000366481 PRDM12Q9H4Q4 367 aa19.89■□□□□ 0.78
TRIM58-201ENST00000366481 CLIC3O95833 236 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 ARL4AP40617 200 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 DPP6P42658 865 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 SYPL2Q5VXT5 272 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 STRA8Q7Z7C7 330 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 ACVR1CQ8NER5 493 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 GATA5Q9BWX5 397 aaPredicted RBP19.89■□□□□ 0.77
TRIM58-201ENST00000366481 PADI4Q9UM07 663 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 TIMM13Q9Y5L4 95 aaPredicted RBP19.89■□□□□ 0.77
TRIM58-201ENST00000366481 BPTFQ12830 3046 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 ZNF839A8K0R7 811 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 FAM72CH0Y354 149 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 HDAC3O15379 428 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 RECQL4O94761 1208 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 GNL1P36915 607 aaPredicted RBP19.89■□□□□ 0.77
TRIM58-201ENST00000366481 IRF9Q00978 393 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 PKDCCQ504Y2 493 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 FAM72AQ5TYM5 149 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 METTL21CQ5VZV1 264 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 FAM72DQ6L9T8 149 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 ELMSAN1Q6PJG2 1045 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 FAM72BQ86X60 149 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 POLR1BQ9H9Y6 1135 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 SLC8A2Q9UPR5 921 aa19.89■□□□□ 0.77
TRIM58-201ENST00000366481 PRSS51A0A1B0GVH4 220 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 HTR3EA5X5Y0 456 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 SERPINB7O75635 380 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 TIFABQ6ZNK6 161 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 GK5Q6ZS86 529 aa19.88■□□□□ 0.77
TRIM58-201ENST00000366481 SETD3Q86TU7 594 aaPredicted RBP19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms