RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 HLTFQ14527 1009 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 PPP1R7Q15435 360 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 TRADDQ15628 312 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 OASLQ15646 514 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 ZC3H12AQ5D1E8 599 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 BSPRYQ5W0U4 402 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SND1Q7KZF4 910 aaKnown RBP eCLIP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SLC41A1Q8IVJ1 513 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 GSPT2Q8IYD1 628 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 NUP93Q8N1F7 819 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 GALNT15Q8N3T1 639 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 MREGQ8N565 214 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 ARL14EPQ8N8R7 260 aaPredicted RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 CCHCR1Q8TD31 782 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SH3RF2Q8TEC5 729 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SETD7Q8WTS6 366 aaKnown RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 NTAN1Q96AB6 310 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SPATA17Q96L03 361 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 CEP295NLQ96MC4 621 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 HSPA12BQ96MM6 686 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 CALN1Q9BXU9 219 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 FBXO44Q9H4M3 255 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 PRORYQ9H606 182 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 CD93Q9NPY3 652 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 TOR4AQ9NXH8 423 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 CALCOCO1Q9P1Z2 691 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 WHRNQ9P202 907 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 UXTQ9UBK9 157 aaPredicted RBP11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 DNPEPQ9ULA0 475 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 FZD10Q9ULW2 581 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 AP4E1Q9UPM8 1137 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 SCML2Q9UQR0 700 aa11.53□□□□□ -0.56
CSNK1E-202ENST00000366216 ARID1BQ8NFD5 2236 aaPredicted RBP11.52□□□□□ -0.56
CSNK1E-202ENST00000366216 CKAP5Q14008 2032 aa11.52□□□□□ -0.56
CSNK1E-202ENST00000366216 FAM92AA1XBS5 289 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 SASH3O75995 380 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 DKK1O94907 266 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 KAT7O95251 611 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 APODP05090 189 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 CYP17A1P05093 508 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 NCAM1P13591 858 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 TCF3P15923 654 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ZFXP17010 805 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 TGM2P21980 687 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 KIR2DL1P43626 348 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ZNF135P52742 658 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 YWHAGP61981 247 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 PITX1P78337 314 aaPredicted RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 CAMK2BQ13554 666 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 CA9Q16790 459 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ANKRD20A8PQ5CZ79 823 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 SLC9A4Q6AI14 798 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 DDX42Q86XP3 938 aaKnown RBP eCLIP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 LURAP1LQ8IV03 231 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 SCN4BQ8IWT1 228 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ARHGAP18Q8N392 663 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 PHTF2Q8N3S3 785 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 CCDC185Q8N715 623 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 PDCD7Q8N8D1 485 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 CCDC89Q8N998 374 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 SCAMP5Q8TAC9 235 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 TRMT2BQ96GJ1 504 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 CCDC114Q96M63 670 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ZDHHC5Q9C0B5 715 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 DPH5Q9H2P9 285 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ACBD3Q9H3P7 528 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 DHX35Q9H5Z1 703 aaKnown RBP11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ABCC13Q9NSE7 274 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 ZDHHC18Q9NUE0 388 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 GPATCH2LQ9NWQ4 482 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 GRHL1Q9NZI5 618 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 SNX24Q9Y343 169 aa11.52□□□□□ -0.57
CSNK1E-202ENST00000366216 A0A0A0MRY4 1105 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 IGHV1OR15-9A0A0B4J2B8 117 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 HAX1O00165 279 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 NDC80O14777 642 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 APOL1O14791 398 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 RTN3O95197 1032 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 IGLV3-25P01717 112 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 ATXN1LP0C7T5 689 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 GNSP15586 552 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 GABRG2P18507 467 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 ITIH2P19823 946 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 IVDP26440 423 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 ITPKBP27987 946 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 TNNT3P45378 269 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 RPL21P46778 160 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 CXCR3P49682 368 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 GRIK2Q13002 908 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 MMRN1Q13201 1228 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 EIF4EBP2Q13542 120 aaPredicted RBP11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 NOMO1Q15155 1222 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 EFHC2Q5JST6 749 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 FAM131BQ86XD5 332 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 RGL4Q8IZJ4 473 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 PQLC3Q8N755 202 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 PLD5Q8N7P1 536 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 BBOF1Q8ND07 529 aa11.51□□□□□ -0.57
CSNK1E-202ENST00000366216 PCDH19Q8TAB3 1148 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms