RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 NUDCD2Q8WVJ2 157 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 NCSTNQ92542 709 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 STAMQ92783 540 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 ZNF333Q96JL9 665 aa4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 TEFMQ96QE5 360 aaKnown RBP4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 RRP7AQ9Y3A4 280 aaKnown RBP4.83□□□□□ -1.64
RNU4-28P-201ENST00000364739 C17orf102A2RUQ5 167 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 PAPSS2O95340 614 aaPredicted RBP4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 IL1AP01583 271 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 HOXC6P09630 235 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 ENO3P13929 434 aaPredicted RBP4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 ITGB8P26012 769 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 GJC1P36383 396 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 HALP42357 657 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 CTXN3Q4LDR2 81 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 PRAMEF19Q5SWL8 479 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 C2CD5Q86YS7 1000 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 SPATA2LQ8IUW3 424 aaPredicted RBP4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 NKAPQ8N5F7 415 aaKnown RBP4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 NEXN-AS1Q8NBZ9 246 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 SPPL3Q8TCT6 385 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 SLC35F5Q8WV83 523 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 MED30Q96HR3 178 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 GFM1Q96RP9 751 aaKnown RBP4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 GRHL1Q9NZI5 618 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 PROCRQ9UNN8 238 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 RAI2Q9Y5P3 530 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 DOCK7Q96N67 2140 aa4.82□□□□□ -1.64
RNU4-28P-201ENST00000364739 NOTCH4Q99466 2003 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 FAM157AC9JC47 383 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 MCM2P49736 904 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 MYBPC2Q14324 1141 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 ME3Q16798 604 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 ADCK5Q3MIX3 580 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 PALB2Q86YC2 1186 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 GHDCQ8N2G8 530 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 BICD2Q8TD16 824 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 NPFFR1Q9GZQ6 430 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 SLCO5A1Q9H2Y9 848 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 WDR6Q9NNW5 1121 aaKnown RBP4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 ATP8A2Q9NTI2 1148 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 CD207Q9UJ71 328 aa4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 TCF20Q9UGU0 1960 aaKnown RBP4.81□□□□□ -1.64
RNU4-28P-201ENST00000364739 KLK10O43240 276 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 ANP32CO43423 234 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 GNLYP22749 145 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 DSCR9P59020 149 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 KRTAP10-6P60371 365 aaPredicted RBP4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 CAPSQ13938 189 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 ZNF324BQ6AW86 544 aaPredicted RBP4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 GJB7Q6PEY0 223 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 LDHAL6AQ6ZMR3 332 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 ZDHHC23Q8IYP9 409 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 RBMXL3Q8N7X1 1067 aaKnown RBP4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 SPATA5Q8NB90 893 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 OR4N2Q8NGD1 307 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 ELP5Q8TE02 316 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 TMEM18Q96B42 140 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 CLSTN3Q9BQT9 956 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 NPLQ9BXD5 320 aaPredicted RBP4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 SEZ6LQ9BYH1 1024 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 SLC32A1Q9H598 525 aa4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 STN1Q9H668 368 aaKnown RBP4.8□□□□□ -1.64
RNU4-28P-201ENST00000364739 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 EYA2O00167 538 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 VWA5AO00534 786 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 PEX12O00623 359 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 IRAK2O43187 625 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 ITM2AO43736 263 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 ADAP00813 363 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 MYZAPP0CAP1 466 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 CKMT1AP12532 417 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 NAGAP17050 411 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 KCNJ4P48050 445 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 ARL4CP56559 192 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 GOLGA8FQ08AF8 430 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 TRAF3Q13114 568 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 RPE65Q16518 533 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 SLC18A3Q16572 532 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 DENND1BQ6P3S1 775 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 FAM83HQ6ZRV2 1179 aaPredicted RBP4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 MON1BQ7L1V2 547 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 TEX45Q8NA69 505 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 DNAAF1Q8NEP3 725 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 LMO3Q8TAP4 145 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 HSPH1Q92598 858 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 LMAN2LQ9H0V9 348 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 MVB12BQ9H7P6 319 aa4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 TTC12Q9H892 705 aaPredicted RBP4.79□□□□□ -1.64
RNU4-28P-201ENST00000364739 VWA3AA6NCI4 1184 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 KDM4EB2RXH2 506 aaPredicted RBP4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 HBP1O60381 514 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 SERPINC1P01008 464 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 WEE2P0C1S8 567 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 TNNT1P13805 278 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 YWHAQP27348 245 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 ARSFP54793 590 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 SLC12A1Q13621 1099 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 NFATC4Q14934 902 aa4.78□□□□□ -1.64
RNU4-28P-201ENST00000364739 FJX1Q86VR8 437 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms