RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 GLUD1P00367 558 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 PRR23D2P0DMB1 279 aaPredicted RBP4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 FGF3P11487 239 aaPredicted RBP4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 RXRAP19793 462 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 GRK6P43250 576 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 GLUD2P49448 558 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 BIRC2Q13490 618 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 NFATC4Q14934 902 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 ADCK5Q3MIX3 580 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 PRAMEF19Q5SWL8 479 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 ANO1Q5XXA6 986 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 NADSYN1Q6IA69 706 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 CAPRIN2Q6IMN6 1127 aaKnown RBP4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 FAM83HQ6ZRV2 1179 aaPredicted RBP4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 MOGAT3Q86VF5 341 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 ANKRD44Q8N8A2 993 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 MIGA1Q8NAN2 632 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 SMRP1Q8NCR6 262 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 OR14A16Q8NHC5 309 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 TMEM163Q8TC26 289 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 CCT6BQ92526 530 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 ATOH1Q92858 354 aaPredicted RBP4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 RILPL2Q969X0 211 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 PPP1R10Q96QC0 940 aaKnown RBP4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 CD93Q9NPY3 652 aa4.34□□□□□ -1.71
RNU6-553P-201ENST00000364047 PRSS44E7EML9 344 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 ACOT8O14734 319 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 IL1AP01583 271 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 NAGAP17050 411 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 PTPN9P43378 593 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 NUDT6P53370 316 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 SHBQ15464 509 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 TAF5Q15542 800 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 CTXN3Q4LDR2 81 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 TDRD12Q587J7 1177 aaKnown RBP4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 CBWD5Q5RIA9 395 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 SH2D4BQ5SQS7 431 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 ATG9BQ674R7 924 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 NCAPH2Q6IBW4 605 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 C8orf82Q6P1X6 216 aaPredicted RBP4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 MON1BQ7L1V2 547 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 FJX1Q86VR8 437 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 TMC8Q8IU68 726 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 RBMXL3Q8N7X1 1067 aaKnown RBP4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 SETD9Q8NE22 299 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 CEP70Q8NHQ1 597 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 TMEM18Q96B42 140 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 RNFT2Q96EX2 444 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 MASTLQ96GX5 879 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 TM6SF1Q9BZW5 370 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 NLKQ9UBE8 527 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 IL36RNQ9UBH0 155 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 HDAC6Q9UBN7 1215 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 FEM1BQ9UK73 627 aa4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 RRP7AQ9Y3A4 280 aaKnown RBP4.33□□□□□ -1.72
RNU6-553P-201ENST00000364047 A0A096LPK6 155 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 EME2A4GXA9 379 aaPredicted RBP4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 CLEC18AA5D8T8 446 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 KDM4EB2RXH2 506 aaPredicted RBP4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 B9A039 149 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 ITM2AO43736 263 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 CKMT1AP12532 417 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 CD72P21854 359 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 GPR12P47775 334 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 RPE65Q16518 533 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 ANKRD45Q5TZF3 282 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 DENND1BQ6P3S1 775 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 GJB7Q6PEY0 223 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 C18orf65Q6ZTR6 163 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 FTSJ3Q8IY81 847 aaKnown RBP4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 DCP1BQ8IZD4 617 aaKnown RBP4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 GHDCQ8N2G8 530 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 TEX45Q8NA69 505 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 CLEC18CQ8NCF0 446 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 SPPL3Q8TCT6 385 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 TBC1D22AQ8WUA7 517 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 FAM84BQ96KN1 310 aaPredicted RBP4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 NPLQ9BXD5 320 aaPredicted RBP4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 CDT1Q9H211 546 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 PTPRHQ9HD43 1115 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 ATP8A2Q9NTI2 1148 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 CD207Q9UJ71 328 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 DNAJC16Q9Y2G8 782 aa4.32□□□□□ -1.72
RNU6-553P-201ENST00000364047 FAM157AC9JC47 383 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 IRAK2O43187 625 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 NBNO60934 754 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 TCEA3O75764 348 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 SOX30O94993 753 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 DHRS4L1P0CG22 281 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 FCGR1AP12314 374 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 HNF1BP35680 557 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 AMTP48728 403 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 PDLIM4P50479 330 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 TRAF2Q12933 501 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 PLCB4Q15147 1175 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 ME3Q16798 604 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 IZUMO4Q1ZYL8 232 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 PATL1Q86TB9 770 aaKnown RBP4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 RBM23Q86U06 439 aaKnown RBP4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 C2CD5Q86YS7 1000 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms