RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 EIF3IQ13347 325 aaKnown RBP14.14□□□□□ -0.15
VPS29-201ENST00000360579 PDCLQ13371 301 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 STIM1Q13586 685 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 PDE1CQ14123 709 aaPredicted RBP14.14□□□□□ -0.15
VPS29-201ENST00000360579 TAF5Q15542 800 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 DEFB133Q30KQ1 61 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 ARSIQ5FYB1 569 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 SETD3Q86TU7 594 aaPredicted RBP14.14□□□□□ -0.15
VPS29-201ENST00000360579 DCAF4L2Q8NA75 395 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 EHBP1Q8NDI1 1231 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 GRIN3AQ8TCU5 1115 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 LMX1AQ8TE12 382 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 ZNF606Q8WXB4 792 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 LENG8Q96PV6 779 aaPredicted RBP14.14□□□□□ -0.15
VPS29-201ENST00000360579 GOLPH3LQ9H4A5 285 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 SPASTQ9UBP0 616 aa14.14□□□□□ -0.15
VPS29-201ENST00000360579 TRIM49BA6NDI0 452 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 TMX2-CTNND1H3BSU7 103 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 K7ERQ8 282 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PSMA7O14818 248 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 MUSKO15146 869 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 SNAP91O60641 907 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PAGE1O75459 146 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 LEFTY1O75610 366 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 GJB6O95452 261 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 ITGB2P05107 769 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 CENPBP07199 599 aaPredicted RBP14.13□□□□□ -0.15
VPS29-201ENST00000360579 RRM1P23921 792 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 ITGB7P26010 798 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 GNA15P30679 374 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 IRAK1P51617 712 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 INHBCP55103 352 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 SNX16P57768 344 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 NME3Q13232 169 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PNOCQ13519 176 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 SPIDRQ14159 915 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PTK2BQ14289 1009 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 ACBD5Q5T8D3 534 aaPredicted RBP14.13□□□□□ -0.15
VPS29-201ENST00000360579 RETSATQ6NUM9 610 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 C22orf39Q6P5X5 142 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 ARHGEF19Q8IW93 802 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 CHST14Q8NCH0 376 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 DENND6BQ8NEG7 585 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 LIN37Q96GY3 246 aaPredicted RBP14.13□□□□□ -0.15
VPS29-201ENST00000360579 TBATAQ96M53 351 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 KREMEN1Q96MU8 473 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PSMB7Q99436 277 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 ARHGAP9Q9BRR9 750 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 BOCQ9BWV1 1114 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 CEP44Q9C0F1 390 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 CAAP1Q9H8G2 361 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 TMEM51Q9NW97 253 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PCDHGA7Q9Y5G6 932 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 ATP6V1DQ9Y5K8 247 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 FADS3Q9Y5Q0 445 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 BSNQ9UPA5 3926 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 DOCK9Q9BZ29 2069 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 PTPN13Q12923 2485 aa14.13□□□□□ -0.15
VPS29-201ENST00000360579 THAP12O43422 761 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 SMAD6O43541 496 aaKnown RBP14.12□□□□□ -0.15
VPS29-201ENST00000360579 TSPAN6O43657 245 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 SFTPCP11686 197 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 L1CAMP32004 1257 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 PPP1R2P41236 205 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 SLC20A2Q08357 652 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 FGL2Q14314 439 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 C6orf132Q5T0Z8 1188 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 ESRP1Q6NXG1 681 aaKnown RBP14.12□□□□□ -0.15
VPS29-201ENST00000360579 CRTC1Q6UUV9 634 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 LRRC31Q6UY01 552 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 DPY19L3Q6ZPD9 716 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 USP53Q70EK8 1073 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 ENOSF1Q7L5Y1 443 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 ASB12Q8WXK4 309 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 RAB7BQ96AH8 199 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 DHTKD1Q96HY7 919 aaPredicted RBP14.12□□□□□ -0.15
VPS29-201ENST00000360579 FAM81BQ96LP2 452 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 SIK2Q9H0K1 926 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 RRN3Q9NYV6 651 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 APOBEC3BQ9UH17 382 aaKnown RBP14.12□□□□□ -0.15
VPS29-201ENST00000360579 KLF15Q9UIH9 416 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 PAXBP1Q9Y5B6 917 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 WASF2Q9Y6W5 498 aa14.12□□□□□ -0.15
VPS29-201ENST00000360579 LMO7DNF2Z398 122 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 PLD2O14939 933 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 RAD51BO15315 384 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 CNTN5O94779 1100 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 ANXA6P08133 673 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 NOS2P35228 1153 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 GGCXP38435 758 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 THOP1P52888 689 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 PFN3P60673 137 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 BRMS1LQ5PSV4 323 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 PERM1Q5SV97 790 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 LINGO4Q6UY18 593 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 ZNF783Q6ZMS7 281 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 ATG14Q6ZNE5 492 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 C11orf57Q6ZUT1 292 aaPredicted RBP14.11□□□□□ -0.15
VPS29-201ENST00000360579 C14orf80Q86SX3 495 aa14.11□□□□□ -0.15
VPS29-201ENST00000360579 PCDH20Q8N6Y1 951 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms