RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 OLAHQ9NV23 265 aa11.58□□□□□ -0.56
CAPN9-202ENST00000354537 ARMC1Q9NVT9 282 aa11.58□□□□□ -0.56
CAPN9-202ENST00000354537 NCKIPSDQ9NZQ3 722 aa11.58□□□□□ -0.56
CAPN9-202ENST00000354537 CD300AQ9UGN4 299 aa11.58□□□□□ -0.56
CAPN9-202ENST00000354537 A0A087WXM4 84 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 E2F8A0AVK6 867 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TSPAN1O60635 241 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SLC35E2BP0CK96 405 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ATP4BP51164 291 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TKTL1P51854 596 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ZNF33AQ06730 810 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 GALNT1Q10472 559 aaPredicted RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SCAPQ12770 1279 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 CDH17Q12864 832 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 USP10Q14694 798 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SAMD4BQ5PRF9 694 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 NAPEPLDQ6IQ20 393 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 APOBEC3FQ8IUX4 373 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 FSTL5Q8N475 847 aaPredicted RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 MFSD2AQ8NA29 543 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 AGR3Q8TD06 166 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ATP6V1E2Q96A05 226 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 CCDC126Q96EE4 140 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 MFSD3Q96ES6 412 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TMA16Q96EY4 203 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ATXN7L3BQ96GX2 97 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SCYL1Q96KG9 808 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TSPAN18Q96SJ8 248 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 NPAS2Q99743 824 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 OSBPL6Q9BZF3 934 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SPATC1LQ9H0A9 340 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ADA2Q9NZK5 511 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 PLXNA1Q9UIW2 1896 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 A0A087X1B8 175 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SH3PXD2BA1X283 911 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TRIM64A6NGJ6 449 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 STX16-NPEPL1H3BU86 382 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TK2O00142 265 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 CLASP2O75122 1294 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 STAMBPO95630 424 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 C7P10643 843 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 HSPA8P11142 646 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TTKP33981 857 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ESRRGP62508 458 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ZBTB17Q13105 803 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 PRPSAP1Q14558 356 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ZBED5Q49AG3 693 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 GLRA4Q5JXX5 417 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 OTUD1Q5VV17 481 aaPredicted RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TMEM198Q66K66 360 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 KRT80Q6KB66 452 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 RWDD4Q6NW29 188 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 C8orf82Q6P1X6 216 aaPredicted RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 Q6ZNX1 250 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TRIM74Q86UV6 250 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TRIM73Q86UV7 250 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TERB1Q8NA31 727 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TNIP2Q8NFZ5 429 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 KCTD13Q8WZ19 329 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 ZUFSPQ96AP4 578 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 HDAC11Q96DB2 347 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 GPR78Q96P69 363 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 PLEKHG4BQ96PX9 1271 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SLC2A13Q96QE2 648 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 MRPL57Q9BQC6 102 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 TMEM79Q9BSE2 394 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 MLPHQ9BV36 600 aaPredicted RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 MRPL46Q9H2W6 279 aaKnown RBP11.57□□□□□ -0.56
CAPN9-202ENST00000354537 SPAG4Q9NPE6 437 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 FAIMQ9NVQ4 179 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 CDH7Q9ULB5 785 aa11.57□□□□□ -0.56
CAPN9-202ENST00000354537 HTRA2O43464 458 aaPredicted RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 SLC25A27O95847 323 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 ATP5F1P24539 256 aaPredicted RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 MSX2P35548 267 aaPredicted RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 ACADVLP49748 655 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 RAB10P61026 200 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 COG7P83436 770 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 SEMA3BQ13214 749 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 PDAP1Q13442 181 aaKnown RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 SPATS1Q496A3 300 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 NHSL2Q5HYW2 709 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 CERCAMQ5T4B2 595 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 LIMS2Q7Z4I7 341 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 COLGALT2Q8IYK4 626 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 CENPLQ8N0S6 344 aaPredicted RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 C7orf31Q8N865 590 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 WNT8BQ93098 351 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 SLC25A23Q9BV35 468 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 MEAF6Q9HAF1 191 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 EML4Q9HC35 981 aaKnown RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 GDAP2Q9NXN4 497 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 CACNA2D2Q9NY47 1150 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 RRN3Q9NYV6 651 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 TMEM181Q9P2C4 612 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 G3BP2Q9UN86 482 aaKnown RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 PPP2R3BQ9Y5P8 575 aa11.56□□□□□ -0.56
CAPN9-202ENST00000354537 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.56□□□□□ -0.56
CAPN9-202ENST00000354537 E7ENX8 843 aa11.55□□□□□ -0.56
CAPN9-202ENST00000354537 ZBTB24O43167 697 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms