RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 LAYNQ6UX15 382 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SLC7A3Q8WY07 619 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 DHRS9Q9BPW9 319 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CALN1Q9BXU9 219 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 DGCR6LQ9BY27 220 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ILKAPQ9H0C8 392 aaPredicted RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 ZNF385DQ9H6B1 395 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CD320Q9NPF0 282 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 FKBP14Q9NWM8 211 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 PCSK1NQ9UHG2 260 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 COPG1Q9Y678 874 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 COL24A1Q17RW2 1714 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 EI24O14681 340 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TRIM24O15164 1050 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SLC22A1O15245 554 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 HDAC3O15379 428 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TYK2P29597 1187 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CAPGP40121 348 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CDC20Q12834 499 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 C6orf10Q5SRN2 563 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 GPATCH4Q5T3I0 446 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 LYPD8Q6UX82 237 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SLC16A12Q6ZSM3 486 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ANKRD13AQ8IZ07 590 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SFRP1Q8N474 314 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.42□□□□□ -0.26
IFT88-202ENST00000351808 KCTD17Q8N5Z5 321 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 OR2T3Q8NH03 318 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 TOP1MTQ969P6 601 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 DUS3LQ96G46 650 aaKnown RBP13.42□□□□□ -0.26
IFT88-202ENST00000351808 VMP1Q96GC9 406 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 SIGLEC10Q96LC7 697 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 WDR18Q9BV38 432 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 CLPBQ9H078 707 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 UNC93B1Q9H1C4 597 aa13.42□□□□□ -0.26
IFT88-202ENST00000351808 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.42□□□□□ -0.26
IFT88-202ENST00000351808 AXIN1O15169 862 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 ACOX3O15254 700 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 MAN1A2O60476 641 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 ALDH1A2O94788 518 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 IL2RBP14784 551 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 ENPP1P22413 925 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 SEPHS1P49903 392 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 TRAP1Q12931 704 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 TRIM71Q2Q1W2 868 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 ANO4Q32M45 955 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 CYBRD1Q53TN4 286 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 GLRA4Q5JXX5 417 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 BROXQ5VW32 411 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PRR23CQ6ZRP0 262 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 DHFR2Q86XF0 187 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
IFT88-202ENST00000351808 PLD6Q8N2A8 252 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 ARFGAP1Q8N6T3 406 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 KCTD6Q8NC69 237 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 ATL1Q8WXF7 558 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 VPS35Q96QK1 796 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 EBNA1BP2Q99848 306 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 LXNQ9BS40 222 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 SEZ6LQ9BYH1 1024 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 MTMR12Q9C0I1 747 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PDZD7Q9H5P4 517 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 ARMC1Q9NVT9 282 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 KCND2Q9NZV8 630 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PKD2L1Q9P0L9 805 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PSAT1Q9Y617 370 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 NAV1Q8NEY1 1877 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 TANC1Q9C0D5 1861 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 KCNN4O15554 427 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 MAP3K6O95382 1288 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 SNAP29O95721 258 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 SPNP16150 400 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 HTR1BP28222 390 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 GRIA1P42261 906 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 MRPS15P82914 257 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 FKBP9P1Q75LS8 142 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 CMC1Q7Z7K0 106 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 PNPT1Q8TCS8 783 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 GATA5Q9BWX5 397 aaPredicted RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 UPF3AQ9H1J1 476 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 MIR1-1HGQ9H1L0 117 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 DDX28Q9NUL7 540 aaKnown RBP13.41□□□□□ -0.26
IFT88-202ENST00000351808 RAD54BQ9Y620 910 aa13.41□□□□□ -0.26
IFT88-202ENST00000351808 VWA5AO00534 786 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 RAD51BO15315 384 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 GRID2O43424 1007 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 UGT2B11O75310 529 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 PSMD10O75832 226 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 TOMM70O94826 608 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 LTFP02788 710 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 ATP6V1B2P21281 511 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 PSMA2P25787 234 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 CNTFP26441 200 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 CD40LGP29965 261 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 SLC25A11Q02978 314 aaKnown RBP13.4□□□□□ -0.26
IFT88-202ENST00000351808 FPGSQ05932 587 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 NPTX1Q15818 432 aa13.4□□□□□ -0.26
IFT88-202ENST00000351808 AASDHQ4L235 1098 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms