RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 EPHX2P34913 555 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 GTF2IP78347 998 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CDC20Q12834 499 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TMEM236Q5W0B7 351 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 GTF2IRD2BQ6EKJ0 949 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ARCQ7LC44 396 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 GTF2IRD2Q86UP8 949 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RHOT1Q8IXI2 618 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CELF2-AS1Q8N7Q2 184 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 SNX31Q8N9S9 440 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 SLC7A3Q8WY07 619 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 HERVK_113Q902F9 699 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 PIK3R3Q92569 461 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 SNX18Q96RF0 628 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 NAP1L4Q99733 375 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 NPAS2Q99743 824 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 DGCR6LQ9BY27 220 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ALOXE3Q9BYJ1 711 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 WDR55Q9H6Y2 383 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 RPRD1BQ9NQG5 326 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TMEM216Q9P0N5 145 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 IFT80Q9P2H3 777 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 VANGL2Q9ULK5 521 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 KLRG2A4D1S0 409 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ZBBXA8MT70 800 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 C9IYK1 514 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 E7ENX8 843 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 H0Y858 1186 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TK2O00142 265 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TPST1O60507 370 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CPNE6O95741 557 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CYP11B1P15538 503 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 GMPRP36959 345 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 NT5C2P49902 561 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 LSM3P62310 102 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 DYNLT1P63172 113 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 CCNA1P78396 465 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ART3Q13508 389 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 POLD3Q15054 466 aaPredicted RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 DUSP7Q16829 419 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ZFP69Q49AA0 526 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 FAM122CQ6P4D5 195 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ABRAXAS1Q6UWZ7 409 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 AGMOQ6ZNB7 445 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 ADAMTSL2Q86TH1 951 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 LDHDQ86WU2 507 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 LRRC47Q8N1G4 583 aaKnown RBP10.8□□□□□ -0.68
CAPN3-203ENST00000349748 SCML4Q8N228 414 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 FAM71DQ8N9W8 422 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 OR2T34Q8NGX1 318 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 OR6F1Q8NGZ6 308 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 KREMEN1Q96MU8 473 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 TBCBQ99426 244 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 FUNDC2Q9BWH2 189 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 MTMR12Q9C0I1 747 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 PCDH9Q9HC56 1237 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 IL37Q9NZH6 218 aa10.8□□□□□ -0.68
CAPN3-203ENST00000349748 KDM3AQ9Y4C1 1321 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 SEMA3DO95025 777 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ELK4P28324 431 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 TNFAIP2Q03169 654 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 TRIM25Q14258 630 aaKnown RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 GJC2Q5T442 439 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ANGEL2Q5VTE6 544 aaKnown RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 XAF1Q6GPH4 301 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ACAD10Q6JQN1 1059 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 HAUS6Q7Z4H7 955 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 PIGZQ86VD9 579 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 PCDH20Q8N6Y1 951 aaKnown RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 S100ZQ8WXG8 99 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 DHX38Q92620 1227 aaKnown RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ZC3H12CQ9C0D7 883 aaKnown RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 MKNK2Q9HBH9 465 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 RGSL1A5PLK6 1076 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 A8MUA0 341 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 E7ESA3 106 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 PDHXO00330 501 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 MBL2P11226 248 aaPredicted RBP10.79□□□□□ -0.68
CAPN3-203ENST00000349748 MYL4P12829 197 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 GFAPP14136 432 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 RBL1P28749 1068 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ATICP31939 592 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ECE1P42892 770 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 PPP3CAQ08209 521 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 HYIQ5T013 277 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 EPHX4Q8IUS5 362 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 C10orf107Q8IVU9 208 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 FAM71AQ8IYT1 594 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ADGRG5Q8IZF4 528 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 PGAM4Q8N0Y7 254 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 TRIM63Q969Q1 353 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 TUBA1CQ9BQE3 449 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 ACSS2Q9NR19 701 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 SMYD2Q9NRG4 433 aa10.79□□□□□ -0.68
CAPN3-203ENST00000349748 RNF103-CHMP3A0A140T963 221 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 E2F8A0AVK6 867 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 CENPXA8MT69 81 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 EVPLLA8MZ36 301 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 TBX1O43435 398 aa10.78□□□□□ -0.68
CAPN3-203ENST00000349748 PROSCO94903 275 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms