RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ARNTP27540 789 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 CSRP3P50461 194 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 CSE1LP55060 971 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 PAN2Q504Q3 1202 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 PIGGQ5H8A4 983 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 NOMO2Q5JPE7 1267 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 GPR142Q7Z601 462 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 GALNT4Q8N4A0 578 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 BHLHE22Q8NFJ8 381 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 ZFAND2BQ8WV99 257 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 LPPQ93052 612 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 NTAN1Q96AB6 310 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 SLC9A7Q96T83 725 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 TNFRSF12AQ9NP84 129 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 MIOSQ9NXC5 875 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 BTBD19C9JJ37 291 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 DNAJA2O60884 412 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 DDHD2O94830 711 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 NSUN2Q08J23 767 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 CDH17Q12864 832 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 CNGA3Q16281 694 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 BNC2Q6ZN30 1099 aaPredicted RBP18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 RNF135Q8IUD6 432 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 STYXQ8WUJ0 223 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 DPF3Q92784 378 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 SLC10A4Q96EP9 437 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 GPR78Q96P69 363 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 RHOJQ9H4E5 214 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 NDFIP2Q9NV92 336 aa18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 COPG1Q9Y678 874 aaKnown RBP18.35■□□□□ 0.53
PTP4A3-202ENST00000349124 ZSWIM8A7E2V4 1837 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 C15orf38-AP3S2A0A0A6YYH1 394 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 SMIM35A0A1B0GVV1 85 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 MAGEB16A2A368 324 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 CABYRO75952 493 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 PMLP29590 882 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 CHRNA4P43681 627 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 CLCNKBP51801 687 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 CHN2P52757 468 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 BEX3Q00994 111 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 SCAPQ12770 1279 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 AP1ARQ63HQ0 302 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 LRRC8EQ6NSJ5 796 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 ARPINQ7Z6K5 226 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 SREK1Q8WXA9 508 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 KLHL32Q96NJ5 620 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 PKP2Q99959 881 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 KIFC1Q9BW19 673 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 TSPYL2Q9H2G4 693 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 VCX3BQ9H321 246 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 WDR41Q9HAD4 459 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 PRDM16Q9HAZ2 1276 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 CYP4F12Q9HCS2 524 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 RNF181Q9P0P0 153 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 NUDT5Q9UKK9 219 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 TLL2Q9Y6L7 1015 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 SHROOM3Q8TF72 1996 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 MBLAC1A4D2B0 266 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 XPOTO43592 962 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 PPARGP37231 505 aaPredicted RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 PGFP49763 221 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 GRM2Q14416 872 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 RBBP5Q15291 538 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 ZNF789Q5FWF6 425 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 TAC4Q86UU9 113 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 PCDH20Q8N6Y1 951 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 KDM1BQ8NB78 822 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 RP9Q8TA86 221 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 NMD3Q96D46 503 aaKnown RBP18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 CNDP1Q96KN2 507 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 GAD1Q99259 594 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 ZNF385DQ9H6B1 395 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 TRHDEQ9UKU6 1024 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 ACOT9Q9Y305 439 aa18.34■□□□□ 0.53
PTP4A3-202ENST00000349124 HHLA1C9JL84 531 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 CLGNO14967 610 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 PMPCBO75439 489 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 KCNA5P22460 613 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 TAS2R39P59534 338 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 DENND5AQ6IQ26 1287 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 TXNDC5Q8NBS9 432 aaKnown RBP18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 CENPKQ9BS16 269 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 CDYLQ9Y232 598 aa18.33■□□□□ 0.53
PTP4A3-202ENST00000349124 TCAF2A6NFQ2 919 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 NCAM2O15394 837 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 PLK1P53350 603 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 PRKAA1Q13131 559 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 SLC12A1Q13621 1099 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 C6orf52Q5T4I8 152 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 ITPRIPL1Q6GPH6 555 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 PKN3Q6P5Z2 889 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 IYDQ6PHW0 289 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 CNSTQ6PJW8 725 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 GK5Q6ZS86 529 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 CNBD2Q96M20 576 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 PPP1R10Q96QC0 940 aaKnown RBP18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 NDNQ99608 321 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 FICDQ9BVA6 458 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 ABHD16BQ9H3Z7 469 aa18.33■□□□□ 0.52
PTP4A3-202ENST00000349124 CHST12Q9NRB3 414 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms