RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 HDAC3O15379 428 aa18.92■□□□□ 0.62
SCARF1-202ENST00000348987 C22orf31O95567 290 aa18.92■□□□□ 0.62
SCARF1-202ENST00000348987 ERVK-10P10266 1014 aa18.92■□□□□ 0.62
SCARF1-202ENST00000348987 TXNP10599 105 aaKnown RBP18.92■□□□□ 0.62
SCARF1-202ENST00000348987 TRIM25Q14258 630 aaKnown RBP18.92■□□□□ 0.62
SCARF1-202ENST00000348987 SEL1L3Q68CR1 1132 aa18.92■□□□□ 0.62
SCARF1-202ENST00000348987 CYS1Q717R9 158 aa18.92■□□□□ 0.62
SCARF1-202ENST00000348987 TRPC7Q9HCX4 862 aa18.92■□□□□ 0.62
SCARF1-202ENST00000348987 TCAF2A6NFQ2 919 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 JUNP05412 331 aaKnown RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 INSRRP14616 1297 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 ARF4P18085 180 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 TPSB2P20231 275 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 KPNA1P52294 538 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 ATXN1P54253 815 aaKnown RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 IRF9Q00978 393 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 RHDQ02161 417 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 NR1D2Q14995 579 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 TPSAB1Q15661 275 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 TFAP2CQ92754 450 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 DCPSQ96C86 337 aaKnown RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 SGF29Q96ES7 293 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 PGLYRP2Q96PD5 576 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 ZBTB26Q9HCK0 441 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 HES2Q9Y543 173 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 TRIM13O60858 407 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 SULT1C4O75897 302 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 GABBR2O75899 941 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 BAIAP3O94812 1187 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 VDRP11473 427 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 STEAP4Q687X5 459 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 CPSF7Q8N684 471 aaKnown RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 C17orf50Q8WW18 174 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 ITPKCQ96DU7 683 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 FAM49BQ9NUQ9 324 aa18.91■□□□□ 0.62
SCARF1-202ENST00000348987 TUBA8Q9NY65 449 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-202ENST00000348987 FAM155AB1AL88 458 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TADA2AO75478 443 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 OXSR1O95747 527 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TGM2P21980 687 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 RALGDSQ12967 914 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 ITGA7Q13683 1181 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 DLG2Q15700 870 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 PPP1R26Q5T8A7 1209 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 ANKRD26P1Q6NSI1 321 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 CHSY3Q70JA7 882 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 DCLK2Q8N568 766 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 SLC15A4Q8N697 577 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 PPP1R13LQ8WUF5 828 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 KHSRPQ92945 711 aaKnown RBP eCLIP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 DHX35Q9H5Z1 703 aaKnown RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 ZNF385DQ9H6B1 395 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 IPO11Q9UI26 975 aaKnown RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 NME7Q9Y5B8 376 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 GPC6Q9Y625 555 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TRIM64CA6NLI5 447 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TMEM114B3SHH9 223 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 E7ENX8 843 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 PPEF2O14830 753 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 HCRTO43612 131 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TIPRLO75663 272 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TFEBP19484 476 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 MGAT1P26572 445 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 EPHX2P34913 555 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 ABCG1P45844 678 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 RPL14P50914 215 aaKnown RBP18.9■□□□□ 0.62
SCARF1-202ENST00000348987 MAPK10P53779 464 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 ITGADQ13349 1161 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 RAB39AQ14964 217 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 BCL2A1Q16548 175 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 SLC2A7Q6PXP3 512 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 KCNT2Q6UVM3 1135 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 TTC30AQ86WT1 665 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 LPGAT1Q92604 370 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 CASP10Q92851 521 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 APBA2Q99767 749 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 CAB39LQ9H9S4 337 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 RNF181Q9P0P0 153 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 RBPJLQ9UBG7 517 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 BRCA2P51587 3418 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 WDR90Q96KV7 1748 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 PAPPA2Q9BXP8 1791 aa18.9■□□□□ 0.62
SCARF1-202ENST00000348987 GRID2O43424 1007 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 HBP1O60381 514 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 ZNF182P17025 639 aaPredicted RBP18.89■□□□□ 0.62
SCARF1-202ENST00000348987 PSME3P61289 254 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 GNA12Q03113 381 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 RFTN1Q14699 578 aaPredicted RBP18.89■□□□□ 0.62
SCARF1-202ENST00000348987 MOGQ16653 247 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 HACE1Q8IYU2 909 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 FAM110BQ8TC76 370 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 ADAMTS16Q8TE57 1224 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 SNRNP25Q9BV90 132 aaKnown RBP18.89■□□□□ 0.62
SCARF1-202ENST00000348987 SMARCAD1Q9H4L7 1026 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 ZDHHC2Q9UIJ5 367 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 PCDHGA7Q9Y5G6 932 aa18.89■□□□□ 0.62
SCARF1-202ENST00000348987 COPG1Q9Y678 874 aaKnown RBP18.89■□□□□ 0.62
SCARF1-202ENST00000348987 KCNU1A8MYU2 1149 aa18.89■□□□□ 0.61
SCARF1-202ENST00000348987 AKAP10O43572 662 aa18.89■□□□□ 0.61
SCARF1-202ENST00000348987 NFKBIAP25963 317 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms