RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 JOSD2Q8TAC2 188 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 WFIKKN2Q8TEU8 576 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 FAM122AQ96E09 287 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 ZNF830Q96NB3 372 aaPredicted RBP10.57□□□□□ -0.72
TPM3-207ENST00000341372 GABRG3Q99928 467 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 TRIM5Q9C035 493 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 SEMA4AQ9H3S1 761 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 CD248Q9HCU0 757 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 TAS2R14Q9NYV8 317 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 SLC12A6Q9UHW9 1150 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 PAXBP1Q9Y5B6 917 aa10.57□□□□□ -0.72
TPM3-207ENST00000341372 DOCK4Q8N1I0 1966 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 PLXND1Q9Y4D7 1925 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 GPR179Q6PRD1 2367 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 NPC1O15118 1278 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 TBL1XO60907 577 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 SERPING1P05155 500 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 RDXP35241 583 aaKnown RBP10.56□□□□□ -0.72
TPM3-207ENST00000341372 RNF144AP50876 292 aaPredicted RBP10.56□□□□□ -0.72
TPM3-207ENST00000341372 RPS24P62847 133 aaKnown RBP10.56□□□□□ -0.72
TPM3-207ENST00000341372 DEUP1Q05D60 604 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 DMWDQ09019 674 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 NME3Q13232 169 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 ENPP2Q13822 863 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 GTF2H3Q13889 308 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 KRT72Q14CN4 511 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 CRY1Q16526 586 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 TUBB8Q3ZCM7 444 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 EOGTQ5NDL2 527 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 ARTNQ5T4W7 220 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 EMC10Q5UCC4 262 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 TMEM215Q68D42 235 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 SPECC1LQ69YQ0 1117 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 STRADAQ7RTN6 431 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 LONP2Q86WA8 852 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 RASSF3Q86WH2 238 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 ALLCQ8N6M5 410 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 EMC1Q8N766 993 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 SPC24Q8NBT2 197 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 FIBINQ8TAL6 211 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 WFDC5Q8TCV5 224 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 RXFP2Q8WXD0 754 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 CENPIQ92674 756 aaPredicted RBP10.56□□□□□ -0.72
TPM3-207ENST00000341372 TTC17Q96AE7 1141 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 CFAP57Q96MR6 1250 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 KCNF1Q9H3M0 494 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 EBF1Q9UH73 591 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 SLC8A2Q9UPR5 921 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 HS3ST4Q9Y661 456 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 DGKBQ9Y6T7 804 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 MYO15AQ9UKN7 3530 aa10.56□□□□□ -0.72
TPM3-207ENST00000341372 SYNJ2BP-COX16A0A087WUM0 186 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 TYW5A2RUC4 315 aaKnown RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 F5H5T6 163 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 SGK1O00141 431 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 TNFRSF10CO14798 259 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 TBX1O43435 398 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 MAP3K6O95382 1288 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 KLF8O95600 359 aaPredicted RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 APBB3O95704 486 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 CAPNS1P04632 268 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 ITGAVP06756 1048 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 KRT3P12035 628 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 RRM1P23921 792 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 CCND1P24385 295 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 HOXC13P31276 330 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 SDC4P31431 198 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 CASP14P31944 242 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 CCDC14Q49A88 953 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 PLEKHA7Q6IQ23 1121 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 DNAJC24Q6P3W2 148 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 ZNF683Q8IZ20 524 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 LGI2Q8N0V4 545 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 TXNDC5Q8NBS9 432 aaKnown RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 TKTL2Q9H0I9 626 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 ISCUQ9H1K1 167 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 WDCPQ9H6R7 721 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 POLR3BQ9NW08 1133 aaPredicted RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 COX16Q9P0S2 106 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 GGA2Q9UJY4 613 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 NENFQ9UMX5 172 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.55□□□□□ -0.72
TPM3-207ENST00000341372 R4GN57 208 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 RIF1Q5UIP0 2472 aaKnown RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 VPS13AQ96RL7 3174 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 SPAG17Q6Q759 2223 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 DMDP11532 3685 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 LUC7L3O95232 432 aaKnown RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 SKILP12757 684 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 PDGFRAP16234 1089 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 ARNTP27540 789 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 CDC25BP30305 580 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 NTSR1P30989 418 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 CNR2P34972 360 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 RFC1P35251 1148 aaPredicted RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 DGKEP52429 567 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 ATXN1P54253 815 aaKnown RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 POU4F2Q12837 409 aa10.55□□□□□ -0.72
TPM3-207ENST00000341372 AUHQ13825 339 aaKnown RBP10.55□□□□□ -0.72
TPM3-207ENST00000341372 E2F5Q15329 346 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms