RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 SEC24AO95486 1093 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 ESRRAP11474 423 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-201ENST00000340611 FAM72AQ5TYM5 149 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 LRRC38Q5VT99 294 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 FAM72DQ6L9T8 149 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 FAM72BQ86X60 149 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 CMASQ8NFW8 434 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-201ENST00000340611 TMEM121Q9BTD3 319 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 MANSC1Q9H8J5 431 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 GMIPQ9P107 970 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 RABL2BQ9UNT1 228 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 AP4E1Q9UPM8 1137 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 ITM2BQ9Y287 266 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 ZWINTO95229 277 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 GJB5O95377 273 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 NOS2P35228 1153 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 PTPN9P43378 593 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 AQP4P55087 323 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 CD300CQ08708 224 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 ACAD11Q709F0 780 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 POLNQ7Z5Q5 900 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 TAC4Q86UU9 113 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 HIPK4Q8NE63 616 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 CENPIQ92674 756 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-201ENST00000340611 SPATA17Q96L03 361 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 KCTD15Q96SI1 283 aaPredicted RBP15.34■□□□□ 0.05
BRAT1-201ENST00000340611 TSSK1BQ9BXA7 367 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 RPL26L1Q9UNX3 145 aaKnown RBP15.34■□□□□ 0.05
BRAT1-201ENST00000340611 LZTS1Q9Y250 596 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 CLUHO75153 1309 aa15.34■□□□□ 0.05
BRAT1-201ENST00000340611 A0A1W2PQ67 120 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 CLPTM1O96005 669 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 GOT1P17174 413 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 ATF6P18850 670 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 SLC18A1P54219 525 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 GPR17Q13304 367 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 PDK3Q15120 406 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 NFE2Q16621 373 aaPredicted RBP15.33■□□□□ 0.05
BRAT1-201ENST00000340611 ANKS3Q6ZW76 656 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 GET4Q7L5D6 327 aaPredicted RBP15.33■□□□□ 0.05
BRAT1-201ENST00000340611 IQCF2Q8IXL9 164 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 ZNF276Q8N554 614 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 METTL25Q8N6Q8 603 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 OR6Y1Q8NGX8 325 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 FBXO27Q8NI29 283 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 ACTL9Q8TC94 416 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 PYDC1Q8WXC3 89 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 DPF3Q92784 378 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 SLC2A13Q96QE2 648 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 MTMR10Q9NXD2 777 aa15.33■□□□□ 0.05
BRAT1-201ENST00000340611 DDX56Q9NY93 547 aaKnown RBP15.33■□□□□ 0.05
BRAT1-201ENST00000340611 SGK1O00141 431 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 KPNA1P52294 538 aaPredicted RBP15.33■□□□□ 0.04
BRAT1-201ENST00000340611 YWHAGP61981 247 aaKnown RBP eCLIP15.33■□□□□ 0.04
BRAT1-201ENST00000340611 OTUD4Q01804 1114 aaKnown RBP15.33■□□□□ 0.04
BRAT1-201ENST00000340611 CYTH1Q15438 398 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 MSS51Q4VC12 460 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 RIPOR1Q6ZS17 1223 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 CENPUQ71F23 418 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 TP53INP2Q8IXH6 220 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 PIP4K2CQ8TBX8 421 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 TTC17Q96AE7 1141 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 CCDC28BQ9BUN5 200 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 XPO7Q9UIA9 1087 aaKnown RBP15.33■□□□□ 0.04
BRAT1-201ENST00000340611 USP3Q9Y6I4 520 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 KANSL1LA0AUZ9 987 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 ALOX15BO15296 676 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 MYLK3Q32MK0 819 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 SYCP2LQ5T4T6 812 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 PM20D1Q6GTS8 502 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 PCDH19Q8TAB3 1148 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 SPATA18Q8TC71 538 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 PAFAH2Q99487 392 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 TRPC7Q9HCX4 862 aa15.33■□□□□ 0.04
BRAT1-201ENST00000340611 TNRC18O15417 2968 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 OR6C75A6NL08 312 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 H3BSA7 217 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 FBXO21O94952 628 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 EFEMP2O95967 443 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 VCLP18206 1134 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 BGNP21810 368 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SLC5A2P31639 672 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 L1CAMP32004 1257 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 EIF2B2P49770 351 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 ELAVL2Q12926 359 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 C9orf50Q5SZB4 431 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 ANKRD22Q5VYY1 191 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SMYD5Q6GMV2 418 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 ALYREFQ86V81 257 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SIX5Q8N196 739 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 NUP93Q8N1F7 819 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 ARHGAP24Q8N264 748 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SHKBP1Q8TBC3 707 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PRICKLE1Q96MT3 831 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 FOXP3Q9BZS1 431 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 KCNK13Q9HB14 408 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 WDR6Q9NNW5 1121 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SPG21Q9NZD8 308 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 RABGEF1Q9UJ41 708 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PCDHGB4Q9UN71 923 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms