RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PRKD2Q9BZL6 878 aa14.88□□□□□ -0.03
RET-201ENST00000340058 TMEM59LQ9UK28 342 aa14.88□□□□□ -0.03
RET-201ENST00000340058 SAC3D1A6NKF1 404 aa14.88□□□□□ -0.03
RET-201ENST00000340058 FFAR3O14843 346 aa14.88□□□□□ -0.03
RET-201ENST00000340058 GPR42O15529 346 aa14.88□□□□□ -0.03
RET-201ENST00000340058 PFDN1O60925 122 aa14.88□□□□□ -0.03
RET-201ENST00000340058 FSBPO95073 299 aa14.88□□□□□ -0.03
RET-201ENST00000340058 CSH1P0DML2 217 aa14.88□□□□□ -0.03
RET-201ENST00000340058 CSH2P0DML3 217 aa14.88□□□□□ -0.03
RET-201ENST00000340058 WDR4P57081 412 aaKnown RBP14.88□□□□□ -0.03
RET-201ENST00000340058 TMED1Q13445 227 aa14.88□□□□□ -0.03
RET-201ENST00000340058 PEX6Q13608 980 aa14.88□□□□□ -0.03
RET-201ENST00000340058 CCDC153Q494R4 210 aa14.88□□□□□ -0.03
RET-201ENST00000340058 ANKS6Q68DC2 871 aa14.88□□□□□ -0.03
RET-201ENST00000340058 CLEC20AQ6ZU45 233 aa14.88□□□□□ -0.03
RET-201ENST00000340058 ZC3H3Q8IXZ2 948 aaKnown RBP14.88□□□□□ -0.03
RET-201ENST00000340058 TEKT4Q8WW24 435 aa14.88□□□□□ -0.03
RET-201ENST00000340058 DPF3Q92784 378 aa14.88□□□□□ -0.03
RET-201ENST00000340058 ARL8BQ9NVJ2 186 aa14.88□□□□□ -0.03
RET-201ENST00000340058 STX18Q9P2W9 335 aaKnown RBP14.88□□□□□ -0.03
RET-201ENST00000340058 RABGEF1Q9UJ41 708 aa14.88□□□□□ -0.03
RET-201ENST00000340058 DNMT3LQ9UJW3 386 aa14.88□□□□□ -0.03
RET-201ENST00000340058 TOP3BO95985 862 aaKnown RBP14.88□□□□□ -0.03
RET-201ENST00000340058 BCL2L1Q07817 233 aa14.88□□□□□ -0.03
RET-201ENST00000340058 PTP4A2Q12974 167 aa14.88□□□□□ -0.03
RET-201ENST00000340058 FASTKQ14296 549 aaKnown RBP14.88□□□□□ -0.03
RET-201ENST00000340058 TEDDM1Q5T9Z0 273 aa14.88□□□□□ -0.03
RET-201ENST00000340058 DENND6AQ8IWF6 608 aa14.88□□□□□ -0.03
RET-201ENST00000340058 FNDC5Q8NAU1 212 aa14.88□□□□□ -0.03
RET-201ENST00000340058 PIK3R5Q8WYR1 880 aa14.88□□□□□ -0.03
RET-201ENST00000340058 OTULINQ96BN8 352 aa14.88□□□□□ -0.03
RET-201ENST00000340058 HBEGFQ99075 208 aa14.88□□□□□ -0.03
RET-201ENST00000340058 TMEM51Q9NW97 253 aa14.88□□□□□ -0.03
RET-201ENST00000340058 GID8Q9NWU2 228 aa14.88□□□□□ -0.03
RET-201ENST00000340058 DERAQ9Y315 318 aa14.88□□□□□ -0.03
RET-201ENST00000340058 PCDHGC4Q9Y5F7 938 aa14.88□□□□□ -0.03
RET-201ENST00000340058 VARS2Q5ST30 1063 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 MFSD5Q6N075 450 aa14.87□□□□□ -0.03
RET-201ENST00000340058 TTC7BQ86TV6 843 aa14.87□□□□□ -0.03
RET-201ENST00000340058 C12orf50Q8NA57 414 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 CMASQ8NFW8 434 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 FAM162AQ96A26 154 aa14.87□□□□□ -0.03
RET-201ENST00000340058 NAF1Q96HR8 494 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 PEBP4Q96S96 227 aa14.87□□□□□ -0.03
RET-201ENST00000340058 MRPL9Q9BYD2 267 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 SLC25A13Q9UJS0 675 aa14.87□□□□□ -0.03
RET-201ENST00000340058 PCDHB8Q9UN66 801 aa14.87□□□□□ -0.03
RET-201ENST00000340058 EME2A4GXA9 379 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 SOAT1P35610 550 aa14.87□□□□□ -0.03
RET-201ENST00000340058 NCALDP61601 193 aa14.87□□□□□ -0.03
RET-201ENST00000340058 UBAP2Q5T6F2 1119 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 SETD3Q86TU7 594 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 TLCD1Q96CP7 247 aa14.87□□□□□ -0.03
RET-201ENST00000340058 ZNF558Q96NG5 402 aa14.87□□□□□ -0.03
RET-201ENST00000340058 C16orf70Q9BSU1 422 aa14.87□□□□□ -0.03
RET-201ENST00000340058 TTPALQ9BTX7 342 aa14.87□□□□□ -0.03
RET-201ENST00000340058 ZDHHC6Q9H6R6 413 aa14.87□□□□□ -0.03
RET-201ENST00000340058 AGO3Q9H9G7 860 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 ZNHIT2Q9UHR6 403 aa14.87□□□□□ -0.03
RET-201ENST00000340058 EFR3BQ9Y2G0 817 aa14.87□□□□□ -0.03
RET-201ENST00000340058 ACTL7BQ9Y614 415 aa14.87□□□□□ -0.03
RET-201ENST00000340058 CXorf49A8MYA2 514 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 FGF10O15520 208 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 TMCC1O94876 653 aa14.87□□□□□ -0.03
RET-201ENST00000340058 IQCF3P0C7M6 154 aa14.87□□□□□ -0.03
RET-201ENST00000340058 EEF1DP29692 281 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 L1CAMP32004 1257 aa14.87□□□□□ -0.03
RET-201ENST00000340058 CYP1B1Q16678 543 aa14.87□□□□□ -0.03
RET-201ENST00000340058 OTUD3Q5T2D3 398 aaPredicted RBP14.87□□□□□ -0.03
RET-201ENST00000340058 ARMC12Q5T9G4 340 aa14.87□□□□□ -0.03
RET-201ENST00000340058 MARK2Q7KZI7 788 aaKnown RBP14.87□□□□□ -0.03
RET-201ENST00000340058 CCDC126Q96EE4 140 aa14.87□□□□□ -0.03
RET-201ENST00000340058 TBATAQ96M53 351 aa14.87□□□□□ -0.03
RET-201ENST00000340058 CXorf56Q9H5V9 222 aa14.87□□□□□ -0.03
RET-201ENST00000340058 ASB8Q9H765 288 aa14.87□□□□□ -0.03
RET-201ENST00000340058 CAPN10Q9HC96 672 aa14.87□□□□□ -0.03
RET-201ENST00000340058 CATSPERZQ9NTU4 200 aa14.87□□□□□ -0.03
RET-201ENST00000340058 CYTH4Q9UIA0 394 aa14.87□□□□□ -0.03
RET-201ENST00000340058 ADAM28Q9UKQ2 775 aa14.87□□□□□ -0.03
RET-201ENST00000340058 TMEM247A6NEH6 219 aa14.86□□□□□ -0.03
RET-201ENST00000340058 TMEM88BA6NKF7 163 aa14.86□□□□□ -0.03
RET-201ENST00000340058 SYNCRIPO60506 623 aaKnown RBP14.86□□□□□ -0.03
RET-201ENST00000340058 CABYRO75952 493 aa14.86□□□□□ -0.03
RET-201ENST00000340058 ATG7O95352 703 aa14.86□□□□□ -0.03
RET-201ENST00000340058 EDN1P05305 212 aa14.86□□□□□ -0.03
RET-201ENST00000340058 EPB42P16452 691 aa14.86□□□□□ -0.03
RET-201ENST00000340058 FGFR3P22607 806 aa14.86□□□□□ -0.03
RET-201ENST00000340058 CRABP2P29373 138 aa14.86□□□□□ -0.03
RET-201ENST00000340058 PCBP1Q15365 356 aaKnown RBP eCLIP14.86□□□□□ -0.03
RET-201ENST00000340058 PGS1Q32NB8 556 aa14.86□□□□□ -0.03
RET-201ENST00000340058 ZNF792Q3KQV3 632 aa14.86□□□□□ -0.03
RET-201ENST00000340058 SPDYE7PQ495Y7 208 aa14.86□□□□□ -0.03
RET-201ENST00000340058 AARS2Q5JTZ9 985 aaKnown RBP14.86□□□□□ -0.03
RET-201ENST00000340058 HERC6Q8IVU3 1022 aa14.86□□□□□ -0.03
RET-201ENST00000340058 AUTS2Q8WXX7 1259 aa14.86□□□□□ -0.03
RET-201ENST00000340058 MED8Q96G25 268 aa14.86□□□□□ -0.03
RET-201ENST00000340058 ARHGAP39Q9C0H5 1083 aa14.86□□□□□ -0.03
RET-201ENST00000340058 VPS9D1Q9Y2B5 631 aa14.86□□□□□ -0.03
RET-201ENST00000340058 PEX1O43933 1283 aa14.86□□□□□ -0.03
RET-201ENST00000340058 MPSTP25325 297 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms