RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 MMP8P22894 467 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 GLDCP23378 1020 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 L1CAMP32004 1257 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ADRA1BP35368 520 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 SOX5P35711 763 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 STAT1P42224 750 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ACADVLP49748 655 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 SERPINH1P50454 418 aaKnown RBP10.87□□□□□ -0.67
CAPN3-202ENST00000337571 NEK3P51956 506 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 DAB2P98082 770 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 E2F1Q01094 437 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 TARDBPQ13148 414 aaKnown RBP eCLIP10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF211Q13398 564 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-202ENST00000337571 POLD3Q15054 466 aaPredicted RBP10.87□□□□□ -0.67
CAPN3-202ENST00000337571 COL28A1Q2UY09 1125 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF284Q2VY69 593 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 SFMBT2Q5VUG0 894 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 KIAA1161Q6NSJ0 714 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 PHLDB2Q86SQ0 1253 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF354CQ86Y25 554 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 EMC1Q8N766 993 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 RXFP2Q8WXD0 754 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 TSC1Q92574 1164 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 ARRDC3Q96B67 414 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 NXPE2Q96DL1 559 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 LRIG1Q96JA1 1093 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 SELENOOQ9BVL4 669 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 SLC17A9Q9BYT1 436 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 NLRC4Q9NPP4 1024 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 EVA1BQ9NVM1 165 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 CA5BQ9Y2D0 317 aa10.87□□□□□ -0.67
CAPN3-202ENST00000337571 CXorf51AA0A1B0GTR3 108 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 A6NNZ2 444 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 PAK4O96013 591 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 RHOQP17081 205 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 DESP17661 470 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 CDK11BP21127 795 aaKnown RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 DGKAP23743 735 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 ITGB7P26010 798 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 NSFP46459 744 aaKnown RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 MAPKAPK2P49137 400 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 CCNHP51946 323 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 SNRPD1P62314 119 aaKnown RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 KRT31Q15323 416 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 C15orf59Q2T9L4 293 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 CCDC14Q49A88 953 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 HES3Q5TGS1 186 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 SASS6Q6UVJ0 657 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 LRRC69Q6ZNQ3 347 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 Q6ZSR6 202 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 STRADAQ7RTN6 431 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 PDZD3Q86UT5 571 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 ZSCAN30Q86W11 494 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 SPNS2Q8IVW8 549 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 TMEM145Q8NBT3 493 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 NEK11Q8NG66 645 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 SLC30A5Q8TAD4 765 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 SLC20A1Q8WUM9 679 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 ISG20Q96AZ6 181 aaKnown RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 C11orf70Q9BRQ4 267 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 OSBPL2Q9H1P3 480 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 MAGEH1Q9H213 219 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 ZDHHC6Q9H6R6 413 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 FZD3Q9NPG1 666 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 SEPT11Q9NVA2 429 aaKnown RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 FANCLQ9NW38 375 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 ADAM22Q9P0K1 906 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 DNAI1Q9UI46 699 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 NOCTQ9UK39 431 aaKnown RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 HS3ST3A1Q9Y663 406 aa10.86□□□□□ -0.67
CAPN3-202ENST00000337571 ANKRD11Q6UB99 2663 aaPredicted RBP10.86□□□□□ -0.67
CAPN3-202ENST00000337571 EIF4E1BA6NMX2 242 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 KRIT1O00522 736 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 FPGTO14772 594 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 FFAR2O15552 330 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 RRP8O43159 456 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 TSPAN6O43657 245 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 SIGLEC6O43699 453 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 RAMP2O60895 175 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ZNF821O75541 412 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ZMPSTE24O75844 475 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 POP4O95707 220 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 PLEKP08567 350 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 CCDC172P0C7W6 258 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ADRB3P13945 408 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ACP1P24666 158 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ACVRL1P37023 503 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ANP32AP39687 249 aaKnown RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 PTPN9P43378 593 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 DUSP3P51452 185 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 CLDN2P57739 230 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 HNRNPKP61978 463 aaKnown RBP eCLIP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 ARF5P84085 180 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 NRG1Q02297 640 aaPredicted RBP10.85□□□□□ -0.67
CAPN3-202ENST00000337571 SEMG2Q02383 582 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 UBXN1Q04323 297 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 RAD51Q06609 339 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 SEL1L3Q68CR1 1132 aa10.85□□□□□ -0.67
CAPN3-202ENST00000337571 TRNP1Q6NT89 227 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms