RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 HUNKP57058 714 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 PRKD1Q15139 912 aaPredicted RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 DGUOKQ16854 277 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 BMT2Q1RMZ1 405 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 DHFR2Q86XF0 187 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 MARVELD2Q8N4S9 558 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 PCDHB18PQ96TA0 734 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 HIPK3Q9H422 1215 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 RNF19AQ9NV58 838 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 TCRBV9S1A1TA0A576 114 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ERI2A8K979 691 aaKnown RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 LIASO43766 372 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 VARSP26640 1264 aaKnown RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 PSMB9P28065 219 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 GRIA3P42263 894 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 DDX39BQ13838 428 aaKnown RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 SNX17Q15036 470 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ABRAXAS1Q6UWZ7 409 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 SLCO6A1Q86UG4 719 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 HS6ST3Q8IZP7 471 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 OR5B17Q8NGF7 314 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ISOC1Q96CN7 298 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 LENG8Q96PV6 779 aaPredicted RBP16.26■□□□□ 0.19
NPHP3-201ENST00000337331 TPK1Q9H3S4 243 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 XPNPEP1Q9NQW7 623 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 TBC1D14Q9P2M4 693 aa16.26■□□□□ 0.19
NPHP3-201ENST00000337331 ENDOD1O94919 500 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 VAPBO95292 243 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 FYNP06241 537 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ABCG1P45844 678 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 FSTL1Q12841 308 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 CDH17Q12864 832 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 KLF10Q13118 480 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 PRKAA1Q13131 559 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 CYP1B1Q16678 543 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ZBED5Q49AG3 693 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 TIGD7Q6NT04 549 aaPredicted RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 UGT2A3Q6UWM9 527 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 OFCC1Q8IZS5 231 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 OR8H2Q8N162 312 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 SNX31Q8N9S9 440 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 RAET1EQ8TD07 263 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 SERAC1Q96JX3 654 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 MBOAT7Q96N66 472 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 P2RX7Q99572 595 aaKnown RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 EXOSC4Q9NPD3 245 aaKnown RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 WWOXQ9NZC7 414 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 FZD1Q9UP38 647 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 VPS9D1Q9Y2B5 631 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 C2orf81A6NN90 581 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 NR5A2O00482 541 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 UBDO15205 165 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 CKMT2P17540 419 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 GRIA2P42262 883 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 MARSP56192 900 aaKnown RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 SLC6A3Q01959 620 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 EFEMP1Q12805 493 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ARHGEF7Q14155 803 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 TGFBIQ15582 683 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 SYTL3Q4VX76 610 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 RAVER1Q8IY67 606 aaKnown RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 LRTOMTQ8WZ04 291 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ELMO1Q92556 727 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 C7orf26Q96N11 449 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 SEPHS2Q99611 448 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 BBS2Q9BXC9 721 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 AASDHPPTQ9NRN7 309 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 SIGLEC16A6NMB1 481 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 TDRD10Q5VZ19 366 aaKnown RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ADGRD1Q6QNK2 874 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 DCDC5Q6ZRR9 648 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ST13P5Q8NFI4 369 aaPredicted RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 NCSTNQ92542 709 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 FBXO32Q969P5 355 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 OTULINQ96BN8 352 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 ITPKCQ96DU7 683 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 FOPNLQ96NB1 174 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 CDC14AQ9UNH5 594 aa16.25■□□□□ 0.19
NPHP3-201ENST00000337331 DRG1Q9Y295 367 aaKnown RBP16.25■□□□□ 0.19
NPHP3-201ENST00000337331 RGSL1A5PLK6 1076 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 CASTOR2A6NHX0 329 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 VPS26AO75436 327 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 FAM163BP0C2L3 166 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 NFYCQ13952 458 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 ELMSAN1Q6PJG2 1045 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 KCNMB4Q86W47 210 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 IRF2BPLQ9H1B7 796 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 DYRK4Q9NR20 520 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 PLLPQ9Y342 182 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 UBIAD1Q9Y5Z9 338 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 SERPIND1P05546 499 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 UBE3AQ05086 875 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 TIGD2Q4W5G0 525 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 HYIQ5T013 277 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 LRRC38Q5VT99 294 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 NPNTQ6UXI9 565 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 DSELQ8IZU8 1212 aa16.24■□□□□ 0.19
NPHP3-201ENST00000337331 PPP1R10Q96QC0 940 aaKnown RBP16.24■□□□□ 0.19
NPHP3-201ENST00000337331 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms