RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PLA2G4CQ9UP65 541 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 SHOC2Q9UQ13 582 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 V9GYQ6 96 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 C2orf71A6NGG8 1288 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 TM9SF1O15321 606 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 ZNF135P52742 658 aaPredicted RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 CYP4F8P98187 520 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 KBTBD12Q3ZCT8 623 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 TFB1MQ8WVM0 346 aaKnown RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 TLCD1Q96CP7 247 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 NMRK1Q9NWW6 199 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 LMCD1Q9NZU5 365 aa11.98□□□□□ -0.49
HDAC6-201ENST00000334136 R3HDM2Q9Y2K5 976 aaKnown RBP11.98□□□□□ -0.49
HDAC6-201ENST00000334136 GJA1P17302 382 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 FGFR3P22607 806 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 STIP1P31948 543 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SERPINB9P50453 376 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 USP10Q14694 798 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 PDK4Q16654 411 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CCDC142Q17RM4 750 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 MFN1Q8IWA4 741 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ZCCHC9Q8N567 271 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 OR6P1Q8NGX9 317 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 GDPD5Q8WTR4 605 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ZNF669Q96BR6 464 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 KLHL4Q9C0H6 718 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 PCDH9Q9HC56 1237 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 MYH15Q9Y2K3 1946 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 TRDMT1O14717 391 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 FAM189A1O60320 539 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ADRA1BP35368 520 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CDK16Q00536 496 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ROR2Q01974 943 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 OCA2Q04671 838 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 RAB33AQ14088 237 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 XKR4Q5GH76 650 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 RETSATQ6NUM9 610 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CPNE8Q86YQ8 564 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 LZTR1Q8N653 840 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 LEMD2Q8NC56 503 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CATSPER1Q8NEC5 780 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CYGBQ8WWM9 190 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 USP13Q92995 863 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ASIC4Q96FT7 647 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 FCRL2Q96LA5 508 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 MRPL1Q9BYD6 325 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 LRRC19Q9H756 370 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ATP13A1Q9HD20 1204 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SAR1AQ9NR31 198 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SOX13Q9UN79 622 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CPQQ9Y646 472 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 C3orf70A6NLC5 250 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 GSTA4O15217 222 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 INPPL1O15357 1258 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 E2F6O75461 281 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ENDOD1O94919 500 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 GSCP56915 257 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SLC25A3Q00325 362 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 POLD3Q15054 466 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 OASLQ15646 514 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 LRRC38Q5VT99 294 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SLC22A17Q8WUG5 538 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 KCTD13Q8WZ19 329 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SLC39A10Q9ULF5 831 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 KDELR1P24390 212 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 MAP4P27816 1152 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 GLRBP48167 497 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 ZBTB17Q13105 803 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 SLC44A4Q53GD3 710 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 C9orf50Q5SZB4 431 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 C16orf46Q6P387 395 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 TAS1R1Q7RTX1 841 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 GRASPQ7Z6J2 395 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 TDHQ8IZJ6 230 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 TDRD5Q8NAT2 981 aaKnown RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 FNIP1Q8TF40 1166 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 KLHL5Q96PQ7 755 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 CINPQ9BW66 212 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 DENND2DQ9H6A0 471 aaPredicted RBP11.97□□□□□ -0.49
HDAC6-201ENST00000334136 RPS6KL1Q9Y6S9 549 aa11.97□□□□□ -0.49
HDAC6-201ENST00000334136 LINC01553A4QN01 128 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 DCXO43602 365 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 EDF1O60869 148 aaKnown RBP11.96□□□□□ -0.49
HDAC6-201ENST00000334136 MYOGP15173 224 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 PMLP29590 882 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 APLFQ8IW19 511 aaPredicted RBP11.96□□□□□ -0.49
HDAC6-201ENST00000334136 ADNPQ9H2P0 1102 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 SUN2Q9UH99 717 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 SLC25A13Q9UJS0 675 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 FBXL21Q9UKT6 434 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 SNX13Q9Y5W8 968 aa11.96□□□□□ -0.49
HDAC6-201ENST00000334136 WDR27A2RRH5 827 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 FKBP6O75344 327 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 PAGE1O75459 146 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 ZMPSTE24O75844 475 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TBX18O95935 607 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 MT-CO1P00395 513 aa11.96□□□□□ -0.5
HDAC6-201ENST00000334136 TFE3P19532 575 aaPredicted RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 CORO1AP31146 461 aaKnown RBP11.96□□□□□ -0.5
HDAC6-201ENST00000334136 ZNF132P52740 706 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms