RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 OXNAD1Q96HP4 312 aaPredicted RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 PWWP2AQ96N64 755 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 RHOXF2Q9BQY4 288 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 TECTAO75443 2155 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 GOLGA6L10A0A0M3HER8 536 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 TP73O15350 636 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 ADAM23O75077 832 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 RNF40O75150 1001 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 APODP05090 189 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 MMP2P08253 660 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 CHRNA3P32297 505 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 MMP13P45452 471 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 IFI35P80217 286 aaPredicted RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 DR1Q01658 176 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 CKAP4Q07065 602 aaKnown RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 CCINQ13939 588 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 TEX44Q53QW1 395 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 ANKRD22Q5VYY1 191 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 MLPHQ9BV36 600 aaPredicted RBP16.78■□□□□ 0.28
SHOX-201ENST00000334060 PCYOX1Q9UHG3 505 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 FBXL21Q9UKT6 434 aa16.78■□□□□ 0.28
SHOX-201ENST00000334060 MYO15AQ9UKN7 3530 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 KRT14P02533 472 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 GLULP15104 373 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 COL9A1P20849 921 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 EIF2DP41214 584 aaKnown RBP16.77■□□□□ 0.28
SHOX-201ENST00000334060 GRIA1P42261 906 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 FNTAP49354 379 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 TJAP1Q5JTD0 557 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 TMCO4Q5TGY1 634 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 MARC1Q5VT66 337 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 C22orf39Q6P5X5 142 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 PID1Q7Z2X4 250 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 TEX26Q8N6G2 289 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 IL17RCQ8NAC3 791 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 ATL2Q8NHH9 583 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 ARRDC2Q8TBH0 407 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 MAIP1Q8WWC4 291 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 PTPRN2Q92932 1015 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 RBM15Q96T37 977 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHOX-201ENST00000334060 UHRF1Q96T88 793 aaPredicted RBP16.77■□□□□ 0.28
SHOX-201ENST00000334060 DPH5Q9H2P9 285 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 KLHL8Q9P2G9 620 aaPredicted RBP16.77■□□□□ 0.28
SHOX-201ENST00000334060 HS3ST2Q9Y278 367 aa16.77■□□□□ 0.28
SHOX-201ENST00000334060 DRG1Q9Y295 367 aaKnown RBP16.77■□□□□ 0.28
SHOX-201ENST00000334060 HACD1B0YJ81 288 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 USP12O75317 370 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 PIGNO95427 931 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 CTSLP07711 333 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 IVDP26440 423 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 ITKQ08881 620 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 FNDC3BQ53EP0 1204 aaKnown RBP16.77■□□□□ 0.27
SHOX-201ENST00000334060 PRPF39Q86UA1 669 aaKnown RBP16.77■□□□□ 0.27
SHOX-201ENST00000334060 ZNF513Q8N8E2 541 aaPredicted RBP16.77■□□□□ 0.27
SHOX-201ENST00000334060 ACDQ96AP0 544 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 RTP4Q96DX8 246 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 TEKT5Q96M29 485 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 NOD2Q9HC29 1040 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 ARGLU1Q9NWB6 273 aaPredicted RBP16.77■□□□□ 0.27
SHOX-201ENST00000334060 EVLQ9UI08 416 aaPredicted RBP16.77■□□□□ 0.27
SHOX-201ENST00000334060 HPCAL4Q9UM19 191 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 VPS13AQ96RL7 3174 aa16.77■□□□□ 0.27
SHOX-201ENST00000334060 A0A0A0MRY4 1105 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 CCDC188H7C350 402 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 PLK4O00444 970 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 NCAM2O15394 837 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 ECEL1O95672 775 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 SCNN1BP51168 640 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 PFKPQ01813 784 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 SLC12A1Q13621 1099 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 HNRNPDQ14103 355 aaKnown RBP16.76■□□□□ 0.27
SHOX-201ENST00000334060 UBXN2BQ14CS0 331 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 DPY19L3Q6ZPD9 716 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 MMGT1Q8N4V1 131 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 FLCNQ8NFG4 579 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 RPLP0P6Q8NHW5 317 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 SPATA13Q96N96 652 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 APOL2Q9BQE5 337 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 CINPQ9BW66 212 aaPredicted RBP16.76■□□□□ 0.27
SHOX-201ENST00000334060 TMEM245Q9H330 911 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 RETREG1Q9H6L5 497 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 C8orf33Q9H7E9 229 aaPredicted RBP16.76■□□□□ 0.27
SHOX-201ENST00000334060 PRDM16Q9HAZ2 1276 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 CD93Q9NPY3 652 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 THAP10Q9P2Z0 257 aaPredicted RBP16.76■□□□□ 0.27
SHOX-201ENST00000334060 ATP8A1Q9Y2Q0 1164 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 SNX24Q9Y343 169 aa16.76■□□□□ 0.27
SHOX-201ENST00000334060 PI15O43692 258 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 CHRNB1P11230 501 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 CR2P20023 1033 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 RHOAP61586 193 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 SEMG2Q02383 582 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 GPS1Q13098 491 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 ZNF235Q14590 738 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 LRRC73Q5JTD7 316 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 CEP112Q8N8E3 955 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 TXNDC5Q8NBS9 432 aaKnown RBP16.75■□□□□ 0.27
SHOX-201ENST00000334060 OR2A12Q8NGT7 310 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 GRIN3AQ8TCU5 1115 aa16.75■□□□□ 0.27
SHOX-201ENST00000334060 SEMA3CQ99985 751 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms