RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 MCMBPQ9BTE3 642 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 AP5M1Q9H0R1 490 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 ATXN3LQ9H3M9 355 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 CRTAC1Q9NQ79 661 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 GDAP2Q9NXN4 497 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 SLC2A6Q9UGQ3 507 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 TLK1Q9UKI8 766 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 PSMD13Q9UNM6 376 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 RAP2CQ9Y3L5 183 aa12.51□□□□□ -0.41
VPS33B-201ENST00000333371 A0A1B0GTW7 788 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 SMIM35A0A1B0GVV1 85 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 MYBPHLA2RUH7 354 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 DLX3O60479 287 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 DNAJA2O60884 412 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 PGK1P00558 417 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 THRAP10827 490 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 DARSP14868 501 aaKnown RBP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ATP6V1B1P15313 513 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 HDCP19113 662 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 SEMA3BQ13214 749 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 CYLC2Q14093 348 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 GRM2Q14416 872 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 LIPMQ5VYY2 423 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 OLFML2BQ68BL8 750 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 BNC2Q6ZN30 1099 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ZNF560Q96MR9 790 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 KLHL32Q96NJ5 620 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 DRC3Q9H069 523 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 VCX3BQ9H321 246 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 GNEQ9Y223 722 aaKnown RBP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 TLL2Q9Y6L7 1015 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 CROCCQ5TZA2 2017 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ANKRD12Q6UB98 2062 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 AURKAO14965 403 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 TIMM44O43615 452 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 RTN3O95197 1032 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 VAPBO95292 243 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 SRGAP2BP0DMP2 458 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 HNRNPLP14866 589 aaKnown RBP eCLIP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 PSEN2P49810 448 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 CPT1AP50416 773 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ZNF157P51786 506 aaPredicted RBP12.5□□□□□ -0.41
VPS33B-201ENST00000333371 CNGA3Q16281 694 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 PIGGQ5H8A4 983 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 MORN1Q5T089 497 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 C6orf52Q5T4I8 152 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 IYDQ6PHW0 289 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ZYG11AQ6WRX3 759 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ZMIZ2Q8NF64 920 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 NAT14Q8WUY8 206 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 SMOQ99835 787 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 PKP2Q99959 881 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 FLRT1Q9NZU1 646 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 ZNF236Q9UL36 1845 aa12.5□□□□□ -0.41
VPS33B-201ENST00000333371 LRIG2O94898 1065 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 CRTAMO95727 393 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 CD4P01730 458 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 PRDX6P30041 224 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 DAOAP59103 153 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 CDKL1Q00532 357 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 ANO4Q32M45 955 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 UBXN11Q5T124 520 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 TSTD2Q5T7W7 516 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 ESRP1Q6NXG1 681 aaKnown RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 GK5Q6ZS86 529 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 GPR22Q99680 433 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 TKTL2Q9H0I9 626 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 SIK2Q9H0K1 926 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 WDR41Q9HAD4 459 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 OR12D3Q9UGF7 316 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 C9IYK1 514 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 PABPC4LP0CB38 370 aaKnown RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 PPARGP37231 505 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 GJA9P57773 515 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 BEX3Q00994 111 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 NSUN2Q08J23 767 aaKnown RBP eCLIP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 CCL14Q16627 93 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 SV2CQ496J9 727 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 NOMO2Q5JPE7 1267 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 METTL21CQ5VZV1 264 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 IL31Q6EBC2 164 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 METTL25Q8N6Q8 603 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 PCDH20Q8N6Y1 951 aaKnown RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 IPMKQ8NFU5 416 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 DNAJC1Q96KC8 554 aaKnown RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 UBE2OQ9C0C9 1292 aaKnown RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 CYP4F12Q9HCS2 524 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 TNFRSF12AQ9NP84 129 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 DMAP1Q9NPF5 467 aaPredicted RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 RIMS3Q9UJD0 308 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 FBXW11Q9UKB1 542 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 IPPQ9Y573 584 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 COPG1Q9Y678 874 aaKnown RBP12.49□□□□□ -0.41
VPS33B-201ENST00000333371 AP4B1Q9Y6B7 739 aa12.49□□□□□ -0.41
VPS33B-201ENST00000333371 DFFAO00273 331 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 MT-CO1P00395 513 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 FAM200BP0CF97 657 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 PCBP1Q15365 356 aaKnown RBP eCLIP12.48□□□□□ -0.41
VPS33B-201ENST00000333371 LRRC8EQ6NSJ5 796 aa12.48□□□□□ -0.41
VPS33B-201ENST00000333371 RWDD4Q6NW29 188 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms