RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 FKBP1AP62942 108 aaKnown RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 XKR3Q5GH77 459 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 SLC27A3Q5K4L6 730 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 SMYD5Q6GMV2 418 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 CAMK1DQ8IU85 385 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 COLGALT2Q8IYK4 626 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 KDM1BQ8NB78 822 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 COLGALT1Q8NBJ5 622 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 HTR3CQ8WXA8 447 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 FBXL20Q96IG2 436 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 CNDP2Q96KP4 475 aaKnown RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 TBCBQ99426 244 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 AGAP2Q99490 1192 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 MAGEB5Q9BZ81 275 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM134Q9H6X4 195 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 NANOGQ9H9S0 305 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 MAP3K20Q9NYL2 800 aaKnown RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 GMPR2Q9P2T1 348 aaKnown RBP12.96□□□□□ -0.34
CCDC60-201ENST00000327554 MID2Q9UJV3 735 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 MFHAS1Q9Y4C4 1052 aa12.96□□□□□ -0.34
CCDC60-201ENST00000327554 TOMM70O94826 608 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 PABPC1P11940 636 aaKnown RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CCNA2P20248 432 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 TRIM16LQ309B1 348 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 ARHGEF16Q5VV41 709 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 NEPROQ6NW34 567 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 ABHD15Q6UXT9 468 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 HACE1Q8IYU2 909 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM130Q8N3G9 435 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 RDH11Q8TC12 318 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 GPRASP2Q96D09 838 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 FEM1CQ96JP0 617 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 C1orf50Q9BV19 199 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 C1QTNF1Q9BXJ1 281 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 MROQ9BYG7 248 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 UNKQ9C0B0 810 aaKnown RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 ADAMTS10Q9H324 1103 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 SPAG4Q9NPE6 437 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 DTLQ9NZJ0 730 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM181Q9P2C4 612 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CPQQ9Y646 472 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CABYRO75952 493 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 IL18RAPO95256 599 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CPNE6O95741 557 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CYP3A5P20815 502 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 IREB2P48200 963 aaKnown RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 NR2C2P49116 596 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CSRP3P50461 194 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 MAPK10P53779 464 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 ACTR2P61160 394 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 FSTL1Q12841 308 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 SEPT6Q14141 434 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 NEDD8Q15843 81 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 DGKDQ16760 1214 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 THOC7Q6I9Y2 204 aaKnown RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 C8orf82Q6P1X6 216 aaPredicted RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 SLC7A5P1Q8MH63 180 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 OR13F1Q8NGS4 319 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 OR2T34Q8NGX1 318 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 OR2T3Q8NH03 318 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 DCPSQ96C86 337 aaKnown RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 ZNF641Q96N77 438 aaPredicted RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 TUBA1CQ9BQE3 449 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 TCHPQ9BT92 498 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 FTHL17Q9BXU8 183 aa12.95□□□□□ -0.34
CCDC60-201ENST00000327554 CPSF3Q9UKF6 684 aaKnown RBP12.95□□□□□ -0.34
CCDC60-201ENST00000327554 C1orf232A0A0U1RR37 186 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 KPNA4O00629 521 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CLPXO76031 633 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 RGS20O76081 388 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 APOA4P06727 396 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 ARSAP15289 507 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 MAP4P27816 1152 aaKnown RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 POLR2IP36954 125 aaKnown RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 PRKAA2P54646 552 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 TMBIM6P55061 237 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 STX5Q13190 355 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CAPSQ13938 189 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 LRRC8EQ6NSJ5 796 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 ABRAXAS1Q6UWZ7 409 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 ZPBP2Q6X784 338 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 VSIG10LQ86VR7 867 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 DHFR2Q86XF0 187 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 OFCC1Q8IZS5 231 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 TMEM176AQ96HP8 235 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 ALPK1Q96QP1 1244 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CGREF1Q99674 301 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 PSD2Q9BQI7 771 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 MCMBPQ9BTE3 642 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 TASP1Q9H6P5 420 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 GBA2Q9HCG7 927 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 JPH1Q9HDC5 661 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CCM2LQ9NUG4 571 aaPredicted RBP12.94□□□□□ -0.34
CCDC60-201ENST00000327554 FAM149AA5PLN7 773 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CLOCKO15516 846 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 CILPO75339 1184 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 BCL10O95999 233 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 IDUAP35475 653 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 OLIG2Q13516 323 aa12.94□□□□□ -0.34
CCDC60-201ENST00000327554 ATP6AP1Q15904 470 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms