RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 POLD2P49005 469 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 USP46P62068 366 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 TXNL4AP83876 142 aaKnown RBP19.37■□□□□ 0.69
RTN4-201ENST00000317610 HPCAP84074 193 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 GALNT2Q10471 571 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 NME3Q13232 169 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 DNAJC1Q96KC8 554 aaKnown RBP19.37■□□□□ 0.69
RTN4-201ENST00000317610 MARK4Q96L34 752 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 ZNF597Q96LX8 424 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 NPAS2Q99743 824 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 C16orf70Q9BSU1 422 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 THEGQ9P2T0 379 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 CIDEBQ9UHD4 219 aa19.37■□□□□ 0.69
RTN4-201ENST00000317610 CCDC160A6NGH7 325 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 TRPC5OSA6NMA1 111 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 SDHDO14521 159 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 PYGLP06737 847 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 GABRB3P28472 473 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 GLRBP48167 497 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 PTK2BQ14289 1009 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 MARCH8Q5T0T0 291 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 GJC2Q5T442 439 aaPredicted RBP19.36■□□□□ 0.69
RTN4-201ENST00000317610 TSTD2Q5T7W7 516 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 CNTN4Q8IWV2 1026 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 PPTC7Q8NI37 304 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 DPF3Q92784 378 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 TMA16Q96EY4 203 aaKnown RBP19.36■□□□□ 0.69
RTN4-201ENST00000317610 TNIP3Q96KP6 325 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 ZNF560Q96MR9 790 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 APBA2Q99767 749 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 APOL2Q9BQE5 337 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 MRPL1Q9BYD6 325 aaKnown RBP19.36■□□□□ 0.69
RTN4-201ENST00000317610 WDR6Q9NNW5 1121 aaKnown RBP19.36■□□□□ 0.69
RTN4-201ENST00000317610 MRPL40Q9NQ50 206 aaKnown RBP19.36■□□□□ 0.69
RTN4-201ENST00000317610 EPS15L1Q9UBC2 864 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 SARDHQ9UL12 918 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 PCDHGA7Q9Y5G6 932 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 CEPT1Q9Y6K0 416 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 ZNF236Q9UL36 1845 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 C9IYK1 514 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 GOLGA8TH3BQL2 631 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 I6L893 689 aaPredicted RBP19.36■□□□□ 0.69
RTN4-201ENST00000317610 CD4P01730 458 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 ZNF286BP0CG31 522 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 TPH1P17752 444 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 PSMC3P17980 439 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 TPI1P60174 286 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 CDH17Q12864 832 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 IL23RQ5VWK5 629 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 PREBQ9HCU5 417 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 ANLNQ9NQW6 1124 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 XPR1Q9UBH6 696 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 RNF11Q9Y3C5 154 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 LTBP3Q9NS15 1303 aa19.36■□□□□ 0.69
RTN4-201ENST00000317610 POLR2AP24928 1970 aaKnown RBP19.35■□□□□ 0.69
RTN4-201ENST00000317610 ASB14A6NK59 587 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 NPR3P17342 541 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 SLC5A2P31639 672 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 PSME3P61289 254 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 TRIM25Q14258 630 aaKnown RBP19.35■□□□□ 0.69
RTN4-201ENST00000317610 NAPEPLDQ6IQ20 393 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 KLC3Q6P597 504 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 MAMDC4Q6UXC1 1216 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 HFE2Q6ZVN8 426 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 CHSY3Q70JA7 882 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 B3GALNT2Q8NCR0 500 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 APPL2Q8NEU8 664 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 DUS3LQ96G46 650 aaKnown RBP19.35■□□□□ 0.69
RTN4-201ENST00000317610 TEKT5Q96M29 485 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 ACOT9Q9Y305 439 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 C7orf72A4D263 438 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 PGK1P00558 417 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 AHSGP02765 367 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 FYNP06241 537 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 CDK4P11802 303 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 YBX3P16989 372 aaKnown RBP eCLIP19.35■□□□□ 0.692e-23■□□□□ 9.5
RTN4-201ENST00000317610 CDH2P19022 906 aaPredicted RBP19.35■□□□□ 0.69
RTN4-201ENST00000317610 PNPLA4P41247 253 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 NDUFV1P49821 464 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 UGP2Q16851 508 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 SLC41A1Q8IVJ1 513 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 CEP70Q8NHQ1 597 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 ZSCAN18Q8TBC5 510 aaPredicted RBP19.35■□□□□ 0.69
RTN4-201ENST00000317610 ATP6V1E2Q96A05 226 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 ADAMTS10Q9H324 1103 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 MRGBPQ9NV56 204 aa19.35■□□□□ 0.69
RTN4-201ENST00000317610 MAGED2Q9UNF1 606 aaPredicted RBP19.35■□□□□ 0.69
RTN4-201ENST00000317610 BEST1O76090 585 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 RECQL4O94761 1208 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 ZNF23P17027 643 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 PTPN1P18031 435 aaKnown RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 AVPR1AP37288 418 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 PGGT1BP53609 377 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 ATXN3P54252 364 aaPredicted RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 DNAJB13P59910 316 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 RAB10P61026 200 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 ZNF772Q68DY9 489 aaPredicted RBP19.34■□□□□ 0.69
RTN4-201ENST00000317610 TAPT1Q6NXT6 567 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 PAOXQ6QHF9 649 aa19.34■□□□□ 0.69
RTN4-201ENST00000317610 AMIGO2Q86SJ2 522 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms