RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 CST3P01034 146 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CPA3P15088 417 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 DPYSL3Q14195 570 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CBX2Q14781 532 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 PCID2Q5JVF3 399 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 BBS7Q8IWZ6 715 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SPATA13Q96N96 652 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 MID1IP1Q9NPA3 183 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 GMEB2Q9UKD1 530 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 ASF1AQ9Y294 204 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 IGKV6D-41A0A0C4DH26 115 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SOCS7O14512 581 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 PRNPP04156 253 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CES1P23141 567 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 RRM2P31350 389 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SERPINB4P48594 390 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 UAP1L1Q3KQV9 507 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 RAVER1Q8IY67 606 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 OR56A4Q8NGH8 313 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 INTS7Q9NVH2 962 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 RRP15Q9Y3B9 282 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 NUP188Q5SRE5 1749 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 SLC31A1O15431 190 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 TACR2P21452 398 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 LPOP22079 712 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 MDH1P40925 334 aaKnown RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 ANKS1BQ7Z6G8 1248 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 CIR1Q86X95 450 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 ARID3BQ8IVW6 561 aaPredicted RBP10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 FNDC5Q8NAU1 212 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 PLD4Q96BZ4 506 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 DUOX1Q9NRD9 1551 aa10.83□□□□□ -0.68
SYNPO2-201ENST00000307142 LRP6O75581 1613 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 COL1A1P02452 1464 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 NUDT2P50583 147 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 DAB2IPQ5VWQ8 1189 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ALKBH2Q6NS38 261 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ZIM3Q96PE6 472 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 IKZF4Q9H2S9 585 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CDC42EP4Q9H3Q1 356 aaKnown RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ANKRD6Q9Y2G4 727 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 NWD2Q9ULI1 1742 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CES2O00748 559 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ACSL4O60488 711 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GLI1P08151 1106 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 RPS7P62081 194 aaKnown RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ELP6Q0PNE2 266 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 HYIQ5T013 277 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 SMAD5Q99717 465 aaKnown RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ERVW-1Q9UQF0 538 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 C22orf31O95567 290 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 VIPP01282 170 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 PLK1P53350 603 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GSTA3Q16772 222 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 PPP1R15BQ5SWA1 713 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 DSELQ8IZU8 1212 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 KLHL5Q96PQ7 755 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GPR88Q9GZN0 384 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 FBXO6Q9NRD1 293 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 KRT84Q9NSB2 600 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 PLIN4Q96Q06 1357 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GCATO75600 419 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CXCR2P25025 360 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 AKT2P31751 481 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 HNF4AP41235 474 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 OVGP1Q12889 678 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 NAA30Q147X3 362 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 PARP15Q460N3 678 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 TIGD5Q53EQ6 642 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ST13P5Q8NFI4 369 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 PRCCQ92733 491 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 TMEM175Q9BSA9 504 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 DPEP2Q9H4A9 486 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 SIRPGQ9P1W8 387 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CACNG4Q9UBN1 327 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 POLG2Q9UHN1 485 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 EVLQ9UI08 416 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ITGB4P16144 1822 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 EIF3HO15372 352 aaKnown RBP eCLIP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 MT-CO1P00395 513 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ERCC2P18074 760 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 TFE3P19532 575 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GP5P40197 560 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 DNAJC3Q13217 504 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 NFYCQ13952 458 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 TPGS2Q68CL5 300 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GRASPQ7Z6J2 395 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 KLK6Q92876 244 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 FEM1CQ96JP0 617 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 MCCC1Q96RQ3 725 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 DPY30Q9C005 99 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 PRMT3O60678 531 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ALAS2P22557 587 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 GJA9P57773 515 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 CYLC2Q14093 348 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 KBTBD12Q3ZCT8 623 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 STXBP5Q5T5C0 1151 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 LRRC49Q8IUZ0 686 aa10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 ST13P4Q8IZP2 240 aaPredicted RBP10.82□□□□□ -0.68
SYNPO2-201ENST00000307142 NOA1Q8NC60 698 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms